Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 319 a.a., transcriptional regulator, DeoR family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 84/311 (27%), Positives = 133/311 (42%), Gaps = 12/311 (3%)

Query: 14  VRVARLYYFQNMTTAAIADEIGTSRATVSRLLSFALERGLVEIRVHDPQQVSGSLEAAIA 73
           V  A LYY   +    IA+ +  SRA+V   L+ A  RG V + +         L A + 
Sbjct: 12  VEAAWLYYHDGLNQTEIAERMRISRASVVNYLNEARTRGWVRVHLDSDVFRGHRLAAELC 71

Query: 74  NHYRLHSIQVVP------VAAAATDKETLQRVTCHAAAYVNSLVTPGTIIGLAWGTTVAQ 127
             + L    VVP        AAA+    + RVT  AA ++  L+ PG  +G++WG T+ Q
Sbjct: 72  ALFGLTDALVVPDDPLDPEGAAAS----VARVTRTAADWLPRLLEPGDRLGVSWGATIYQ 127

Query: 128 IADQLLPRHVHDVDVVALNGSGSGASFINSFSESIVSRFAQNYGARAHHLPVPAFFDYPE 187
           +A Q+    V D+ V+ L GS   A  +   +E+  +  AQ  G    +L VP       
Sbjct: 128 MAQQVPNAPVPDLRVIQLLGSRPAA--LGFAAEACTAMLAQRLGGECINLHVPLVLSNKA 185

Query: 188 TRTALWREKSIKAIRDLQERASILLFSIGAEATGSYIHTAGYLGEEERQILRDEGLVGDI 247
            R AL  E  ++   +     +  + + G     +++  +G +  +     R +G VG I
Sbjct: 186 LRDALCDEPVVREQLEALASCNKTVLACGTCDADAHVVRSGIVTSDSISDYRAKGAVGVI 245

Query: 248 ATVFFRADGSWRDVAFNARNSGPDMDCFTRAAHALCVVSGAGKLPGLKAALRGGFINELI 307
                   G         R  G  +D       AL V +G G+    KAA++GGF+  L+
Sbjct: 246 CGRLIDVKGQPVVAEVEDRMIGVTLDQMRGKDMALLVAAGPGRAAPAKAAIKGGFVTHLV 305

Query: 308 IDEPSARLLVE 318
             +  A  L+E
Sbjct: 306 TSKRIAEDLLE 316