Pairwise Alignments

Query, 342 a.a., chemotaxis protein CheY from Herbaspirillum seropedicae SmR1

Subject, 351 a.a., Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain from Pseudomonas stutzeri RCH2

 Score =  166 bits (419), Expect = 1e-45
 Identities = 106/329 (32%), Positives = 173/329 (52%), Gaps = 7/329 (2%)

Query: 1   VKIGIVNDTPMMVEVLRRVIAESGRHELIWIARDGEQAVQMCAWQLPDVVLMDLLMPKVD 60
           +K+ IV+D+ ++ +VL   +      ++I  A D   A++      PDV+++D+ MP++D
Sbjct: 2   IKVFIVDDSALVRQVLTACLDSHPGIQVIGQAADPLFALEKMQRDWPDVLVLDVEMPRMD 61

Query: 61  GAEATRRIMEATPCPILVVTSDMDTSADKIYEAMGYGALDATQTPALIGAAGKRD--AAA 118
           G    R+IM   P P ++ ++  +  A    EA+  GA+    T A +G        ++ 
Sbjct: 62  GITFLRKIMAERPTPAIICSTLTEAGAAITLEALAAGAVGVF-TKARLGLKESLQQLSSE 120

Query: 119 LIEKIDNLGRLSPEMVSPPVRGGRAETLAPAQPARADSLPPLVAVGASAGGPAALATLLK 178
           LI +I+   R  P           + +  P+  A   +   ++A+G S GG  AL  +L+
Sbjct: 121 LIRQIEQAARSRPRAAVRAQAKPSSPSREPSPAAGLTTTDRVIALGTSTGGTQALELVLR 180

Query: 179 AIPQGFAGAVVIVQHIDAAFAPGMAQWLQQQSALKVGLAQEGQAPQRGAVLLAASNRHLV 238
            +P    G +VIVQH+   F    AQ L     ++V  A+     + G  L+A   RH+ 
Sbjct: 181 QLPADSPG-IVIVQHMPEKFTAAFAQRLNNLCQIEVREARHLDRVRAGLALVAPGGRHMQ 239

Query: 239 VKEGGRLGYVE---GAPNDVYRPSVDVFFQSIVRHWPGKVAGLLLTGMGRDGAAGLKALR 295
           +K  G   +VE   G P + ++PSVDV F+S+ RH      G+++TGMG DGA GL  +R
Sbjct: 240 LKRSGAQYFVEVLDGPPVNRHKPSVDVLFRSVARHAGHNALGIIMTGMGDDGARGLLNMR 299

Query: 296 DSGAHTMAQDQKSCAVYGMPKAAVALNAA 324
           ++GA T+AQD+ SC V+GMPK A+ + AA
Sbjct: 300 EAGARTVAQDEASCVVFGMPKEALQIGAA 328