Pairwise Alignments

Query, 342 a.a., chemotaxis protein CheY from Herbaspirillum seropedicae SmR1

Subject, 354 a.a., chemotaxis protein CheB from Sinorhizobium meliloti 1021

 Score =  173 bits (438), Expect = 7e-48
 Identities = 124/349 (35%), Positives = 181/349 (51%), Gaps = 18/349 (5%)

Query: 1   VKIGIVNDTPMMVEVLRRVIAESGRHELIWIARDGEQAVQMCAWQLPDVVLMDLLMPKVD 60
           V+I +   T  + ++++R I      EL+ IAR G +AV+M    LPD+V ++L     D
Sbjct: 2   VRILLATSTVELEDLVKRAIEGDASAELVLIARSGREAVRMTGELLPDIVAVELCPSGDD 61

Query: 61  GAEATRRIMEATPCPILVVT----SDMDTSADKIYEAMGYGALDATQTPALIGAAGKRDA 116
            AE  R IM A P P+++++    S + T + +  EA   GAL     PA  G   ++ A
Sbjct: 62  SAETVREIMIAAPTPVVMLSHRDGSQLGTISARALEA---GALAVIPAPAAHGMQLEQPA 118

Query: 117 AALIEK-IDNLGRLSPEMV----SPPVRGGRAETLAPAQPARADSLPPLVAVGASAGGPA 171
              IEK +  +  +S   V       VRG RA   A  QP  A +   +V + AS GGPA
Sbjct: 119 ---IEKFLSTIKAMSQVKVVRQWRQKVRGDRA---AKDQPPTARTPIGIVGIAASTGGPA 172

Query: 172 ALATLLKAIPQGFAGAVVIVQHIDAAFAPGMAQWLQQQSALKVGLAQEGQAPQRGAVLLA 231
           A+  +LK I       ++IVQH+   F  G+A  L     L V +A+ G+  + G V LA
Sbjct: 173 AIRAILKDISADLPVPILIVQHMSNGFIDGVAASLNATVPLTVKVARNGELLKPGTVYLA 232

Query: 232 ASNRHLVVKEGGRLGYVEGAPNDVYRPSVDVFFQSIVRHWPGKVAGLLLTGMGRDGAAGL 291
             N  L V    RL   + AP + ++PS    F SI R + G+   ++LTGMG DG  GL
Sbjct: 233 PDNCQLGVSGRSRLRVSDDAPVNGFKPSGSYLFGSIARAFKGESLAVVLTGMGDDGTEGL 292

Query: 292 KALRDSGAHTMAQDQKSCAVYGMPKAAVALNAAVEVLPVTGMAARLQAI 340
           +ALR +G   +AQD+KS  V+GMPK+A+       VLP+  +A  + AI
Sbjct: 293 RALRMAGGKAIAQDEKSSVVFGMPKSAIGAGLVDLVLPLESIAENITAI 341