Pairwise Alignments

Query, 266 a.a., competence protein ComL from Herbaspirillum seropedicae SmR1

Subject, 241 a.a., outer membrane protein assembly factor BamD from Vibrio cholerae E7946 ATCC 55056

 Score =  174 bits (442), Expect = 1e-48
 Identities = 87/208 (41%), Positives = 137/208 (65%), Gaps = 2/208 (0%)

Query: 36  AKLYSEAKDELNAGGYDKAIKYFEKLESRYPFGTYAQQAQMDIAYAYYRQNEQAQGLAAV 95
           ++LYSEA+  L +G +  AI+  E L+SRYPFG Y++Q Q+D+ YAYY+ ++ A GLA +
Sbjct: 31  SQLYSEAQTALQSGTWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATI 90

Query: 96  DRFIKLHPNHPNVDYMYYLRGLINF-NDRTSIFDTFTDQDNTERDPKAMRDAFDSFKLLA 154
           +RF +L+P H  +D++ Y+RGL +   DR  + D F + D  +RDP+ ++ AF  FK L 
Sbjct: 91  ERFTRLNPTHEKMDWVLYMRGLTHMAQDRNFMHDLF-NIDRRDRDPEPVKAAFADFKKLL 149

Query: 155 ERFPDSKYTPDAIARMKYLVNAMSQYDVHVASYYFRRGAYVSAANRAQSAIKQYPDSPAN 214
           +R+P+S Y  DA  RM  L N +++YD+  A +Y RR A+++A NR Q   K YPD+ A 
Sbjct: 150 QRYPNSPYAEDAQRRMFALKNRLAEYDLATADFYLRREAWIAAINRTQELQKTYPDTEAA 209

Query: 215 EEALFILMRSYEALGQTKLKEDTERIIQ 242
            ++L I + +Y+ LG T   E T++++Q
Sbjct: 210 RKSLEIQLEAYQQLGLTDAIERTKQLMQ 237