Pairwise Alignments

Query, 420 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Herbaspirillum seropedicae SmR1

Subject, 417 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Sinorhizobium meliloti 1021

 Score =  550 bits (1416), Expect = e-161
 Identities = 280/418 (66%), Positives = 332/418 (79%), Gaps = 4/418 (0%)

Query: 3   SSPIASGPLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARA 62
           SS     P  RR S  V +  GG  ++VGGGAPV+VQSMTNTDTAD   T  Q+  L +A
Sbjct: 2   SSAFDFEPQPRRAS--VAVDVGG--VIVGGGAPVVVQSMTNTDTADIDATVAQVAALHKA 57

Query: 63  GSEVVRLTVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYR 122
           GSE+VR+TV+  E+AAAVP IRE+L R+G+DVPLVGDFHY GH LL ++P CA+AL+KYR
Sbjct: 58  GSELVRITVDRDESAAAVPKIRERLLRLGIDVPLVGDFHYIGHKLLADHPACAEALAKYR 117

Query: 123 INPGNVGKGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENAGRAEPWSA 182
           INPGNVG   K+D QFA++IE+A +YDKPVRIGVNWGSLDQ LL R+MD N     P +A
Sbjct: 118 INPGNVGFKDKKDKQFAEIIEMAIRYDKPVRIGVNWGSLDQELLTRLMDANQANGSPLTA 177

Query: 183 QAVMYEALVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGL 242
           Q VM E +V SA+ +A+ AEELG+   +IILS KVSGVQDLIAVY  LA R  + LHLGL
Sbjct: 178 QQVMRETIVQSALLSAELAEELGLPRSRIILSAKVSGVQDLIAVYAMLAARSVHALHLGL 237

Query: 243 TEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKF 302
           TEAGMG+KGIVAS+A+L +L+Q+GIGDTIRISLTPEPGGDRT+EV V QE+LQ MG R+F
Sbjct: 238 TEAGMGTKGIVASSASLGILMQQGIGDTIRISLTPEPGGDRTREVQVAQELLQVMGFRQF 297

Query: 303 TPMVIACPGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGE 362
            P+V ACPGCGRTTSTVFQ+LA KIQ  +R  MPVW+ KYPGVEA+ VAVMGCIVNGPGE
Sbjct: 298 IPVVAACPGCGRTTSTVFQELAQKIQEDIRASMPVWREKYPGVEALKVAVMGCIVNGPGE 357

Query: 363 SKHANIGISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYVESHYGQGHPA 420
           SKHA+IGISLPGTGE PAAPVFIDG+K +TLRG  IAE+FQ +V DY+E  +G G  A
Sbjct: 358 SKHADIGISLPGTGEMPAAPVFIDGQKALTLRGPKIAEDFQLLVADYIEKRFGHGQAA 415