Pairwise Alignments

Query, 420 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Herbaspirillum seropedicae SmR1

Subject, 372 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Marinobacter adhaerens HP15

 Score =  209 bits (532), Expect = 1e-58
 Identities = 142/401 (35%), Positives = 221/401 (55%), Gaps = 50/401 (12%)

Query: 10  PLVRRNSRRVVISHGGREIVVGGGAPVMVQSMTNTDTADAIGTAIQIKDLARAGSEVVRL 69
           P++RR SR++++ +    + VGG AP+ VQSMTNT+T D   T  QIK L  AG+++VR+
Sbjct: 6   PIIRRKSRQIMVGN----VPVGGDAPIAVQSMTNTETCDVEATVGQIKALQEAGADIVRV 61

Query: 70  TVNTPEAAAAVPAIREQLDRMGVDVPLVGDFHYNGHTLLTEYPECAQALSKYRINPGNVG 129
           +V + +AA A   IREQ     V +PLV D H++    L         L   RINPGN+G
Sbjct: 62  SVPSMDAAEAFGKIREQ-----VSLPLVADIHFDYKIALRVAELGVDCL---RINPGNIG 113

Query: 130 KGAKRDTQFAQMIEVACKYDKPVRIGVNWGSLDQALLARIMDENAGRAEPWSAQAVMYEA 189
               RD + + +I  A   + P+RIGVN GSL+++L  +  +  A             +A
Sbjct: 114 ----RDDRVSAVISAARDGNIPIRIGVNAGSLEKSLQRKYGEPTA-------------DA 156

Query: 190 LVTSAIENAQRAEELGMAGDKIILSCKVSGVQDLIAVYRELARRCDYPLHLGLTEAGMGS 249
           LV SA+ +    +       K+  S K S V   +  YR++A++ + PLHLG+TEAG   
Sbjct: 157 LVESAMRHIDILDRHDFQDFKV--SLKASEVFMTVDAYRKIAQQIEQPLHLGITEAGGLR 214

Query: 250 KGIVASTAALSVLLQEGIGDTIRISLTPEPGGDRTKEVVVGQEILQTMGLRKFTPMVIAC 309
            G V S+  L +LL +GIGDTIR+SL  +P     +E+ VG +IL+++ LR      IAC
Sbjct: 215 SGTVKSSIGLGMLLMDGIGDTIRVSLAADP----VQEIKVGFDILKSLRLRSRGINFIAC 270

Query: 310 PGCGRTTSTVFQDLADKIQTFLREQMPVWKGKYPGVEAMNVAVMGCIVNGPGESKHANIG 369
           P C R    V Q + D ++  L +            ++++VA++GCIVNGPGE+K A++G
Sbjct: 271 PSCSRQNFDVIQTMND-LEARLEDVN----------DSLDVAIIGCIVNGPGEAKVADLG 319

Query: 370 ISLPGTGESPAAPVFIDGEKKMTLRGEHIAEEFQKVVLDYV 410
           +    TG SP    ++ G+    L    + ++ ++++ + V
Sbjct: 320 L----TGGSPKNLFYMAGKPNQKLDNATLTDDLERLIREEV 356