Pairwise Alignments

Query, 395 a.a., efflux transmembrane protein from Herbaspirillum seropedicae SmR1

Subject, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  366 bits (940), Expect = e-106
 Identities = 189/383 (49%), Positives = 269/383 (70%), Gaps = 5/383 (1%)

Query: 1   MPIALWALTISAFAIGTTEFVIMGLLPEVAANLGVSLSSAGLLVTGYALGVFVGAPLLTA 60
           MP+A++ALTI+A+AIGTTEFVI+GLLP VA +L ++L  AGL+V+ YALGV  GAP+LTA
Sbjct: 1   MPLAIFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTA 60

Query: 61  TTGRLPRKTLLVALMVVFVVGNLACAIAPDYTTLMIGRVVASFAHGAFFGVGSVVATSLV 120
            TGR+ RK LL+ LM +F+ GN A A++P+Y  L++ RV+++FAHG FF VGS +A  LV
Sbjct: 61  LTGRIERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLV 120

Query: 121 PKEKQASAIALMFTGLTVANVLGVPFGTWLGQSYGWRATFWAVTVIGVIALAATAVLVPR 180
           P+ ++ASAIA+MF GLTVA V GVP GT++GQ +GWRATFW V+ +GV+A A  A L+P 
Sbjct: 121 PENRRASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPG 180

Query: 181 SQG-GEETDFGKEVRVLMRPQVMLGLLMTVLGFGGVFAAFTYIAPILTDLSGFPASAVSP 239
           +           +VRVL   ++++   MT LG+GG F AFT++APIL +++GF   +VS 
Sbjct: 181 TLAKAAPASLLDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQEVTGFSERSVSL 240

Query: 240 ILLLFGLGLVIGNLAGGKLADKKLMATLLGSLVLLAAVLVLFGLTVDNKVAAIIGVGLMG 299
           IL+L+G+ + IGN+AGG++A+   +  L+G  +L A VLV+F  T  + V  ++ +  +G
Sbjct: 241 ILVLYGVAIAIGNIAGGRIANTNPVKALIGLFLLQALVLVIFSFTAVSPVLTLVTLAALG 300

Query: 300 MAAFATVPPLQMRV----LEKATGAPNLASSANIAAFNLGNAAGAWLGGVTIDHGPGLHA 355
             +FA VP LQ+ V    +E   GA ++AS+ NIAAFNLG A GAWLGG+ +D   GL A
Sbjct: 301 FLSFANVPGLQLYVVQLAMEHRPGAVDVASALNIAAFNLGIALGAWLGGMVVDSPFGLSA 360

Query: 356 VPYVAALLPLAGIVVALVSWKMD 378
            P+V A+L    +++ L S  +D
Sbjct: 361 TPWVGAILVSGALLLTLWSGVLD 383