Pairwise Alignments

Query, 423 a.a., MFS transporter from Herbaspirillum seropedicae SmR1

Subject, 424 a.a., arabinose efflux permease family protein from Dechlorosoma suillum PS

 Score =  140 bits (353), Expect = 7e-38
 Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 13/394 (3%)

Query: 26  FKLFWCASVASTIALQMQIVAVGWQVYQLTHSALDLGIVGLVQFIPSLILVFVVGHVADR 85
           ++L++   + S     MQ +A+ W  Y+L++SA  LG VG    IP L      G  +DR
Sbjct: 13  YRLYFVGQLISLAGTWMQQIAMAWLAYRLSNSAFVLGSVGFASQIPILFFSAFAGVWSDR 72

Query: 86  FDRRNVARVSALVEALAAATLAAGSLGGWLNREIIFVIVAVIGAGRAFSKPTMSALLPSL 145
            DRR +  +S  +  + A  LA  +   W+   ++  +   +G   A   P   A+   L
Sbjct: 73  VDRRRLLLLSQSLSMVQALVLAVLAWLEWITPGLLIFMALCLGCINALDVPARQAIAVQL 132

Query: 146 MSPRQ-LPGAVAGSASATQFAIIIGPALGGFLYVA-GPAVVYASSCVLFTLCSLLLWLIR 203
           +  ++ LP A+A ++     A  +GPAL G+L V  G AV +  + + +    L L  IR
Sbjct: 133 VDDKEDLPNAIALNSFLMNAARFVGPALAGYLVVLMGEAVCFLLNALSYLAVLLALSAIR 192

Query: 204 RPAQAGAPAAAAKPTGASLSSVFAGLAFIRSKPAIFGAISL-DMFAVLLGGATALLPVFA 262
            PAQ  +  A A      L ++  G+ ++R    I  ++ L    + L      ++P+FA
Sbjct: 193 LPAQGPSRPAPA------LDALKEGIRYVRGHGPIRRSLLLVSCISFLATPYAVMMPLFA 246

Query: 263 HDILHTGAAGLGLLRSAPAAGALAVALWLA-RRPLGGRVGRTMFVAVGVFGLATMVFGLS 321
            +I    A   GLL     AG+L  + +LA RR  GG  G+    A  V G A   F LS
Sbjct: 247 REIFGGDAGTFGLLMGCAGAGSLVASFFLASRRDTGGLEGKVALAAPAV-GAALTCFALS 305

Query: 322 RSFPLSLAALAVLGAADMISVVVRSSFVQLETPDAMRGRVSAVNSV-FIGTSNQLGEFES 380
            S  ++   +  +G   +I++   ++ +Q    +A RGRV A+ S+ F+G +  LG F  
Sbjct: 306 PSQQVAYPIIMSIGFCVIITIAGSNTLIQTRVNNAYRGRVMAIFSMAFLGIA-PLGSFIV 364

Query: 381 GLTAAWFGAVPAVLIGGVGTLLIVLLWVRLFPAL 414
           G  A   G  P +   G+ TL   L++ RL  A+
Sbjct: 365 GSVAHQVGIRPTLAACGLLTLAAGLVYRRLTRAV 398