Pairwise Alignments
Query, 510 a.a., calcium-binding protein from Herbaspirillum seropedicae SmR1
Subject, 3059 a.a., hemolysin-type protein from Ralstonia solanacearum IBSBF1503
Score = 73.6 bits (179), Expect = 1e-16
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 332 GADTVTTDDPIKL----RNQNLDATGNELDNILVGN-----------RGNNALTGGKG-N 375
G +T+TT D NL GN + + VG+ G NA+ G G N
Sbjct: 2867 GGNTLTTGDGNNTVWMGAGSNLIVVGNGNNTVGVGSADGSHNTIQVGNGVNAIEVGAGAN 2926
Query: 376 DLLIGGA------GNDTYAFAKGDGQDVLYDHDATKGNLDTLSFSD-VKQTNLWLSKAGN 428
D+ +G GN G GQ L ++ G DT+ S V++ LW ++ G+
Sbjct: 2927 DIYVGNGTDTVKTGNGVNTLHLGTGQVTLTNY----GGQDTVYLSSSVQEDQLWFTQDGS 2982
Query: 429 DLRIDVLGTTDQVLVKDWYVGGDSGSDNHVERIKTADGKTLYDSDVDKLVQAMASFAPPA 488
DL + V GT+ + + DW+ G + + +DG L DS V LVQAMA F PP
Sbjct: 2983 DLLVTVDGTSSNLRLTDWFNGATHAT------LVASDGHQLVDSQVASLVQAMAQFTPPP 3036
Query: 489 ATQTS 493
A QTS
Sbjct: 3037 AGQTS 3041
Score = 53.5 bits (127), Expect = 1e-10
Identities = 82/350 (23%), Positives = 132/350 (37%), Gaps = 56/350 (16%)
Query: 63 LNGIGNALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEGVDTVY 122
+NG N L +RL G N+ ++G G D + G +GDD+ D +V G+G D
Sbjct: 673 VNGTDNVLGDRLYGGGGNDTINGRAGDDYLEGDEGDDTLTGGTGNDTLV--GGKGFD--- 727
Query: 123 ATASTTLAANVENLVLLDASKPQSAVVNGVNVLVYGMPRS-------YQLDYDQGGEVEG 175
S + A N ++DA V +G+ + G + + G EV
Sbjct: 728 ---SYIIDAQSGNDAIVDADGAGQIVFDGMQLTGTGRLHAKTSSSTVWSETLSSGLEVRY 784
Query: 176 YWGTCGETSVANVTLMGGHAVSEKEVVQRAIKENLCDTAAESADTRGATSEDDRQALLQD 235
Y+ ++T+ GG+ S N D A + A S + +QA
Sbjct: 785 YYNQ----QTRDLTITGGNGSS-------VTVRNFEDGALGIRIPQSADSVERQQAAT-- 831
Query: 236 FGFAASVEEELDLKAVAQSI-----KDGKGVIISVSASKLWDLHEENEDASDHAITVTGV 290
A + ++ Q++ DGK + S EN +A + G+
Sbjct: 832 ---VADLSTYEGMRTYDQTLFPFEQVDGKDKRVPKDIS----FRAENVK---NAYGLWGI 881
Query: 291 ACSAASGKIVGFYIADSGRGLASDMCRFVSLQRLRAATNVYGADTVT-------TDDPIK 343
+ IVG D G S S +Y +D VT ++ +
Sbjct: 882 DTNGGDDVIVGGIKQDLGLNYGSG-----SWHTGGGNDRIYVSDEVTLARAIERSETDAR 936
Query: 344 LRNQNLDATGNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGD 393
+ + L G D+ + G+ N+ + GG G D ++GGAG D FA GD
Sbjct: 937 IDARPLAIAGGAGDDAIYGDGTNSVIFGGDGADTIVGGAG-DNIIFADGD 985
Score = 52.8 bits (125), Expect = 2e-10
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 22/164 (13%)
Query: 352 TGNELDNILVGNRGNNALTGGKGNDLLIGGAGND---------TYAFAKGDGQDVLYDHD 402
+G +L + L G G++ L+GG GND LIGGAGND T+ FA GDG D + D
Sbjct: 1662 SGGDLADGLSGGNGDDFLSGGIGNDTLIGGAGNDWLSDDQGANTFRFAAGDGSDQI---D 1718
Query: 403 ATKGNLDTLSFSDVKQTNLWLSKAGNDLRIDVL---GTTDQVLVKDWYVGGDSGSDNHV- 458
+ S V +++L +S + DVL G DQ+ V + + +G
Sbjct: 1719 GINRDSVIAFDSSVGRSSLEMSLEQHGKDWDVLIRYGNGDQIRVHNGFSLSGAGVPTFAF 1778
Query: 459 ERIKTADGKTLYDSDVDKLVQAMASFAPPAATQTSWPETAGGNG 502
I+ ADG L ++ +AS TS +T G G
Sbjct: 1779 AGIRLADGGFLSTDEM------LASLRGVQGNVTSGADTLIGGG 1816
Score = 50.8 bits (120), Expect = 7e-10
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 353 GNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHDATKGNLDTLS 412
G+E D++L G G++ L GG GND+L+GG G+D + +G D LY A+KG+
Sbjct: 1341 GDEGDDLLSGGAGDDVLHGGTGNDVLLGGDGDD--SLYGDEGNDTLY---ASKGSDYLAG 1395
Query: 413 FSDVKQTNLWLSKAGNDLRIDVL--GTTDQVLVKDWYVGGDSGSD-NHVERIKTADGKTL 469
S + L A +++R VL T D + D+G D ++++ I+T DG+ +
Sbjct: 1396 GSGTDRYVFALGTAQSEMRDGVLQVHTIIDDADADTQIVFDAGIDPSNIKAIETPDGRLV 1455
Query: 470 YDSDVD 475
D
Sbjct: 1456 IQFSTD 1461
Score = 48.1 bits (113), Expect = 5e-09
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 353 GNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHD 402
G D+ L G+ G++ LTGG GND L+GG G D+Y G D + D D
Sbjct: 695 GRAGDDYLEGDEGDDTLTGGTGNDTLVGGKGFDSYIIDAQSGNDAIVDAD 744
Score = 48.1 bits (113), Expect = 5e-09
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 360 LVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHDATKGNLDTLSFSD-VKQ 418
L+G ++ L G GND L+GG G D Y A G G D + D A ++++ F + ++
Sbjct: 1812 LIGGGSDDVLDGAAGNDTLLGGGGRDIYRIAAGSGVDTIIDPGA---GVESIEFGEGIRV 1868
Query: 419 TNLWLSKAGNDLRIDVLGTTD 439
+L + + G+DL + GT D
Sbjct: 1869 EDLVVRQVGSDLYV---GTRD 1886
Score = 47.4 bits (111), Expect = 8e-09
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 28/158 (17%)
Query: 61 SSLNGI-GNALD--NRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEG 117
+SL G+ GN + L G +++LDG G DT++GG G D Y + AG G
Sbjct: 1796 ASLRGVQGNVTSGADTLIGGGSDDVLDGAAGNDTLLGGGGRDIYRI---------AAGSG 1846
Query: 118 VDTVYATASTTLAANVENLVLLDASKPQSAVVNGVNVLVYGMPRSYQLDYDQGGEVEGY- 176
VDT+ A VE++ + + + VV V +Y R D+ G + GY
Sbjct: 1847 VDTIIDP-----GAGVESIEFGEGIRVEDLVVRQVGSDLYVGTR----DHSAGARILGYF 1897
Query: 177 ------WGTCGETSVANVTLMGGHAVSEKEVVQRAIKE 208
W SV ++ ++E E ++ A +E
Sbjct: 1898 SNGQKTWNISASGSVLDIQAALALPMTEVERLRNAFEE 1935
Score = 47.0 bits (110), Expect = 1e-08
Identities = 46/148 (31%), Positives = 61/148 (41%), Gaps = 35/148 (23%)
Query: 332 GADTV----TTDDPIKLRNQNLD-ATGNELDNILVGNRGNNALTGGKGNDLLIGGAGNDT 386
G DT+ T D L + N D G D++L G GN+ L GG GND L G G+D
Sbjct: 1288 GNDTLIGDSTEDATPTLTSSNDDYLDGGAGDDLLQGQLGNDVLLGGDGNDRLYGDEGDDL 1347
Query: 387 YAFAKGD-------GQDVLYDHDATKGNLDTLSFSDVKQTNLWLSKAGNDLRIDVLGTTD 439
+ GD G DVL D D + D L+ SK G+D
Sbjct: 1348 LSGGAGDDVLHGGTGNDVLLGGDG-----DDSLYGDEGNDTLYASK-GSD---------- 1391
Query: 440 QVLVKDWYVGGDSGSDNHVERIKTADGK 467
Y+ G SG+D +V + TA +
Sbjct: 1392 -------YLAGGSGTDRYVFALGTAQSE 1412
Score = 42.7 bits (99), Expect = 2e-07
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 353 GNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHD 402
G + ++ L+G G + L GG GND++ GG G DTY + +G + D +
Sbjct: 2170 GGDGNDTLIGTEGMDILVGGTGNDVMAGGFGADTYWIGRSEGDADIIDDE 2219
Score = 39.7 bits (91), Expect = 2e-06
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 357 DNILVGNRGNNALTGGKGNDLLIGGAGNDTYA-------FAKGDGQDVLY 399
D+++ GN+ + G+GND + GG+GND A GDG D +Y
Sbjct: 1089 DDVVYAGAGNDVVNAGRGNDTVFGGSGNDVIAGYDGDDFIDGGDGDDRIY 1138
Score = 37.7 bits (86), Expect = 6e-06
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 353 GNELDNILVGNRGNNALTGGKGND--LLIGGAGNDTYAFAKGDGQDV 397
G+E D+ L G GN+ L GGKG D ++ +GND A G GQ V
Sbjct: 704 GDEGDDTLTGGTGNDTLVGGKGFDSYIIDAQSGNDAIVDADGAGQIV 750
Score = 36.6 bits (83), Expect = 1e-05
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 10/70 (14%)
Query: 346 NQNLDATGNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVL------- 398
N ++ T N L + L G GN+ + G G+D L G G+DT G G D L
Sbjct: 670 NDVVNGTDNVLGDRLYGGGGNDTINGRAGDDYLEGDEGDDT--LTGGTGNDTLVGGKGFD 727
Query: 399 -YDHDATKGN 407
Y DA GN
Sbjct: 728 SYIIDAQSGN 737
Score = 36.2 bits (82), Expect = 2e-05
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 349 LDATGNELDNILVGNRGNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLY-----DHDA 403
LDA+ + D L G GN+ + GG G+D+++GG GND G D++ +D
Sbjct: 1167 LDASQHGSD-YLTGGAGNDYIFGGGGSDIVLGGNGNDVLY-----GDDIVLPGRYAGNDY 1220
Query: 404 TKGNLDTLSFSDVKQTNLWLSKAGNDLRI-DVLGTTDQVLVKDWYVGGDSGSDNHVERIK 462
G + L AGND + D L Q D+ GGD D+ +
Sbjct: 1221 IDGGDGDDKVVGGGGADYILGGAGNDYLVGDGLYDEAQWQGNDYIDGGD--GDDELRGGG 1278
Query: 463 TADGKTLYDSDVDKLVQAMASFAPPAATQTSWPETAGGNGKVLL 506
AD L + D L+ A P T ++ GG G LL
Sbjct: 1279 GAD-TLLGGNGNDTLIGDSTEDATPTLTSSNDDYLDGGAGDDLL 1321
Score = 35.4 bits (80), Expect = 3e-05
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 76 GNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEGVDTV 121
G+ + + L G+GG T+ GG G+D L G+ I+ QAG+G D +
Sbjct: 1509 GSSRGDHLTGIGGA-TVNGGLGNDLIDLSGTGNTILYQAGDGADLI 1553
Score = 34.7 bits (78), Expect = 5e-05
Identities = 88/394 (22%), Positives = 149/394 (37%), Gaps = 67/394 (17%)
Query: 88 GTDTMIGGKGDDSYYLDNAGDKIVE-QAGEGVDTVYATASTTL----AANVE-------N 135
G ++G + +DS+ + A E Q G+G +TV + S A N + N
Sbjct: 2563 GLQRVVGNQANDSFAVKGAAGSSAELQLGDGNNTVSSQDSNVTVYVGAGNNDLILGDGGN 2622
Query: 136 LVLLDASKPQSAVVNGVNVLVYGMPRSYQLDYDQGGEVEGYWGTCGETSVANV--TLMGG 193
+V ++ S+ + NG N + G + Q+ G + G +V N TL G
Sbjct: 2623 IVTVNRSQHSANASNGNNKVYLGNGGN-QVSLGDGSNIVGVGTGDNAITVGNGDNTLYAG 2681
Query: 194 HAVSEKEVVQRAIKENLCDTAAESADTRGATSEDDRQALLQDFG----FAASVEEELDLK 249
H + T + A+ T D ++ G + + + +
Sbjct: 2682 HGAGTNTI-----------TFGDGANV--VTVGDGANTVVGGNGRNTIWGGNGGNHVTVG 2728
Query: 250 AVAQSIKDGKGVIISVSASKLWDLHEENEDASDHAITVTGVACSAASGKIVGFYIA-DSG 308
+ +I G G + + ++ N D+ IT+ G + +G IA D+G
Sbjct: 2729 SGNDTIGLGNGSNVVSAGDGANNVSVGN---GDNQITLGGGHNTVNAGSGANTVIAGDAG 2785
Query: 309 RGL-ASDMCRFVSLQRLRAATNVYGADTVTTDDPIKLRNQNLDATGNELDNILVGNRG-- 365
+ A D + L GADT+ N +DA G DN + RG
Sbjct: 2786 NAVYAGDGANTIKLGS--------GADTIGVGGG----NNTIDAGGG--DNTIYAGRGAG 2831
Query: 366 NNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHDATKGNLDTLSFSDVKQTNLWLSK 425
NN +T G G +++ GN T G G + + + GN TL+ D T +W+
Sbjct: 2832 NNVITAGDGRNVVT--VGNGTNQITLGRGNNAV--NGGNGGN--TLTTGDGNNT-VWMGA 2884
Query: 426 AGNDLRIDVLGTTDQVLVKDWYVGGDSGSDNHVE 459
N + V+G + + VG GS N ++
Sbjct: 2885 GSN---LIVVGNGNNTV----GVGSADGSHNTIQ 2911
Score = 33.5 bits (75), Expect = 1e-04
Identities = 74/330 (22%), Positives = 119/330 (36%), Gaps = 46/330 (13%)
Query: 74 LTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKIVEQAGEGVDTVYATASTTLA-AN 132
+ G D ++ L G GG DT++GG G+D+ D+ D D + A L
Sbjct: 1265 IDGGDGDDELRGGGGADTLLGGNGNDTLIGDSTEDATPTLTSSNDDYLDGGAGDDLLQGQ 1324
Query: 133 VENLVLLDASKPQSAVVNGVNVLVYGMPRSYQLDYDQGGEVEGYWGTCGETSVANVTLMG 192
+ N VLL N +YG L G +V + GT N L+G
Sbjct: 1325 LGNDVLLGGDG---------NDRLYGDEGDDLLSGGAGDDVL-HGGT------GNDVLLG 1368
Query: 193 GHAVSEKEVVQRAIKENLCDTAAESADTRGATSEDDRQALLQDFGFAASVEEELDLKAVA 252
G E DT A+ D A G + + L
Sbjct: 1369 GDGDDSLY-------------GDEGNDTLYASKGSDYLA-----GGSGTDRYVFALGTAQ 1410
Query: 253 QSIKDGKGVIISVSASKLWDLHEENEDASDHAITVTGV-ACSAASGKIVGFYIADSGRGL 311
++DG + ++ + D + + D I + + A G++V + D L
Sbjct: 1411 SEMRDGVLQVHTI----IDDADADTQIVFDAGIDPSNIKAIETPDGRLVIQFSTDGAFAL 1466
Query: 312 ASDMCRFVSLQRLRAATNVYGADTVTT--DDPIKLRNQNLDATGNELDNILVGNRGNNAL 369
+ S+ T + G D V ++ ++ G+ + L G G +
Sbjct: 1467 TGGVNALGSVS-FSDGTVIDGRDFVGKYLSTAREVTGSYVEVRGSSRGDHLTGI-GGATV 1524
Query: 370 TGGKGNDLL-IGGAGNDTYAFAKGDGQDVL 398
GG GNDL+ + G GN T + GDG D++
Sbjct: 1525 NGGLGNDLIDLSGTGN-TILYQAGDGADLI 1553
Score = 30.8 bits (68), Expect = 7e-04
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 365 GNNALTGGKGNDLLIGGAGNDTYAFAKGDGQDVLYDHD 402
G++ + G GND++ G GNDT G G DV+ +D
Sbjct: 1088 GDDVVYAGAGNDVVNAGRGNDT--VFGGSGNDVIAGYD 1123
Score = 28.9 bits (63), Expect = 0.003
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 60 GSSLNGIGN---------ALDNRLTGNDQNNILDGMGGTDTMIGGKGDDSYYLDNAGDKI 110
G+ G+GN +N GN N I G GG +T+ G G ++ +AG+ +
Sbjct: 2730 GNDTIGLGNGSNVVSAGDGANNVSVGNGDNQITLG-GGHNTVNAGSGANTVIAGDAGNAV 2788
Query: 111 VEQAGEGVDTV 121
AG+G +T+
Sbjct: 2789 --YAGDGANTI 2797