Pairwise Alignments

Query, 559 a.a., methyl-accepting chemotaxis transducer transmembrane protein from Herbaspirillum seropedicae SmR1

Subject, 519 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  201 bits (510), Expect = 8e-56
 Identities = 118/320 (36%), Positives = 188/320 (58%), Gaps = 1/320 (0%)

Query: 225 LLAVAVVVILAVSLRLLYRGSAGPLAQATSMLAQLARGDLSDSAPVRARGQVAALLDALQ 284
           LL + V +++ V LR + R   G  A A  + A++A G+L      +A G   +LL A+Q
Sbjct: 197 LLCLVVSLVIGVILRSILRQLGGEPAYAAQIAARIADGELDVIVDTKA-GDDTSLLAAMQ 255

Query: 285 RLRKAIVRLVKGVHAGAAAIQNAAGDMAAGTEHVVARTEEQAQALLQAAASMQQLAGTVQ 344
           R+++ +   +  +  GA  I   + ++AAG   +  RTE+QA AL + A+SM+Q+  TV+
Sbjct: 256 RMQQRLAHAITQIRGGATLISTVSNEIAAGNADLSRRTEQQATALGETASSMEQITATVK 315

Query: 345 QHTAHTHQASRLARRACEVVRRSAAEVEQVASAMAAIKASSARITDLGGLIDSIAVQSKL 404
           Q+  +  QAS+LA  A E   R    V+QV   M  I  SS RI D+ G+I+ IA Q+ +
Sbjct: 316 QNADNAKQASQLAHNASETAARGGEVVDQVVETMRGISQSSHRIGDIIGVIEGIAFQTNI 375

Query: 405 LGASASLAGCGSGVGGRTLSSVAQDVSALAQRTASAAAEFKSLTETALQQIQNGSRKAVQ 464
           L  +A++    +G  GR  + VA +V +LAQR+A+AA E K+L E +  QI+ GS+   +
Sbjct: 376 LALNAAVEAARAGEEGRGFAVVAGEVRSLAQRSAAAAKEIKTLIEESAAQIEGGSQYVSR 435

Query: 465 AEGAMREAVYSVERVSQLIGQIAEVNLEQTSGIDQVVQVLRQVQLLTQQNGLLLQQTTSA 524
           A   M E V +V RV+ ++G+I+  ++EQ+SGI+QV   +  +   TQQN  L+++ +++
Sbjct: 436 AGETMHEVVQAVRRVTDIMGEISAASVEQSSGIEQVNIAVASMDQTTQQNAALVEEASAS 495

Query: 525 ARALNEQTEQLTQAAAEFRL 544
           A  L  QT QL+ A A F L
Sbjct: 496 ADVLKAQTGQLSAAIAVFTL 515