Pairwise Alignments

Query, 559 a.a., methyl-accepting chemotaxis transducer transmembrane protein from Herbaspirillum seropedicae SmR1

Subject, 588 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  212 bits (539), Expect = 4e-59
 Identities = 128/359 (35%), Positives = 212/359 (59%), Gaps = 6/359 (1%)

Query: 195 DDMVGLLEQRTARE---VALAQLLAQRLAWLSTLLAVAVVVILAVSLRLLYRGSAGPLAQ 251
           DD++   +  +ARE    A +     R+  +S LL   +  +  +S   L R  A PL  
Sbjct: 162 DDVLRKYQFTSAREGYDSAQSSFGVFRMVSMSALLIGVLAAV--ISYLTLSRAIARPLDA 219

Query: 252 ATSMLAQLARGDLSDSAPVRARGQVAALLDALQRLRKAIVRLVKGVHAGAAAIQNAAGDM 311
           A      +A GDL     V +R ++  LLD + ++++++   V+ V +G+ +I  A   +
Sbjct: 220 ALGHFDAIAAGDLRRPVVVTSRDEMGQLLDGIAKMQRSLTETVRTVRSGSESIATATRQI 279

Query: 312 AAGTEHVVARTEEQAQALLQAAASMQQLAGTVQQHTAHTHQASRLARRACEVVRRSAAEV 371
           AAG   + +RTEEQA AL + A+SM++L GTV+Q+  +  QAS LA  A E+  + +A V
Sbjct: 280 AAGNIDLSSRTEEQASALQETASSMEELTGTVKQNADNARQASSLAANASEIANKGSAVV 339

Query: 372 EQVASAMAAIKASSARITDLGGLIDSIAVQSKLLGASASLAGCGSGVGGRTLSSVAQDVS 431
            QV   M  I  SSA+I D+  +I+ IA Q+ +L  +A++    +G  GR  + VA +V 
Sbjct: 340 GQVVGTMGDINQSSAKIADIISIIEGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVR 399

Query: 432 ALAQRTASAAAEFKSLTETALQQIQNGSRKAVQAEGAMREAVYSVERVSQLIGQIAEVNL 491
           +LAQR+++AA E K L +T+++++Q+GS    +A   M E + +V+RV+ ++G+IA  + 
Sbjct: 400 SLAQRSSAAAKEIKELIDTSVERVQSGSALVDEAGRTMTEIIGAVQRVTDIMGEIAAASE 459

Query: 492 EQTSGIDQVVQVLRQVQLLTQQNGLLLQQTTSAARALNEQTEQLTQAAAEFRL-EAGYE 549
           EQ+SGIDQV + + Q+  +TQQN  L+++  +AA +L +Q  +L  A A F L E+GY+
Sbjct: 460 EQSSGIDQVARAVTQMDEVTQQNAALVEEAAAAASSLEDQAGKLRTAVAVFHLEESGYK 518