Pairwise Alignments

Query, 393 a.a., iron-regulated membrane protein from Herbaspirillum seropedicae SmR1

Subject, 381 a.a., iron-regulated membrane protein from Caulobacter crescentus NA1000

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 98/397 (24%), Positives = 150/397 (37%), Gaps = 62/397 (15%)

Query: 4   LHRWTGLGMAFFLIVTSLTGSLLVFDDELDAWLAPQLQLAQPAPGQSAQAMMDPYLLREK 63
           +H W GL +     V  LTGS+LVF   +D  L P+++L   AP  S + +      R  
Sbjct: 16  VHLWLGLSIGVLFAVVGLTGSILVFYTAIDDALHPEIRLRGAAPPPSWEQVYQT--ARAT 73

Query: 64  VAQAMGPQVHISQLVLHARPGRTVSFQADPATDPATGKPYRLGYD----EILVNPYTGVV 119
                GP       V  A       +   P        P  + +      ++   Y G  
Sbjct: 74  YPDKAGPWRFE---VTEAGGDIPARYYKPPERADRDFAPMMVWFSADGGRVIRRDYWGEY 130

Query: 120 QGVRDRDKISLKPADLMPFLFKLHHSLALPRAPGALLLGTVGLLWTLDCFVGMILTWPRA 179
                           M +++ LHH L L +A G  +LG  GL        G+   WPR 
Sbjct: 131 A---------------MTWVYDLHHRLLL-QATGGAILGWSGLAMLALMVAGLTAWWPRR 174

Query: 180 RPFLVKWKPAWLIKWRAGFYRVNLDLHRAFGLWCWVMLLLFAWSSVMLNLRDQIYL---- 235
                 W+ A  +K RA   R   D H+  GLW + +L+L   + V+L L  +  +    
Sbjct: 175 GG----WRKALQMKPRAAPLRKLYDWHKQTGLWSFGLLVLLTLTGVLLALPKESEIALRP 230

Query: 236 --------PVMSRILSFDTSWRPGPPLPQALSGPPQSWPEAHALARRTMDGFARQRGLVI 287
                   P + + ++FD    PG  +         S  +A A+A+  + G AR   +  
Sbjct: 231 ILGPPAGAPTIDKSITFD----PGTRI---------SVDQAVAIAQGALPG-ARLAWIET 276

Query: 288 DFEEKLDFDRRRGVYIYLVHSNADLRADVGNTGLRIDARTGKILGHWLPVGDRDGNTFSN 347
              +        GVY   + +  D      ++ + I   TG++L           +   N
Sbjct: 277 PSTDS-------GVYRLRLQTPGDPSRRFPHSFVWITPATGEVLAMTDARQAGAHDVLLN 329

Query: 348 WLGALHMGHVFGLPWRILLVLVGGAVSLLTVTGVVVW 384
           W   LH     GLP R+L VLVG A S L + G + W
Sbjct: 330 WTHPLHDASAGGLPARLLAVLVGLAPSALLILGFMRW 366



 Score = 38.9 bits (89), Expect = 2e-07
 Identities = 49/189 (25%), Positives = 73/189 (38%), Gaps = 25/189 (13%)

Query: 5   HRWTGLGMAFFLIVTSLTGSLLVFDDELDAWLAPQLQLAQPAPGQSAQAMMDPYLLREKV 64
           H+ TGL     L++ +LTG LL    E +  L P L     AP        DP       
Sbjct: 197 HKQTGLWSFGLLVLLTLTGVLLALPKESEIALRPILGPPAGAPTIDKSITFDP------- 249

Query: 65  AQAMGPQVHISQLVLHAR---PGRTVSFQADPATDPAT--------GKP-YRLGYDEILV 112
               G ++ + Q V  A+   PG  +++   P+TD           G P  R  +  + +
Sbjct: 250 ----GTRISVDQAVAIAQGALPGARLAWIETPSTDSGVYRLRLQTPGDPSRRFPHSFVWI 305

Query: 113 NPYTGVVQGVRDRDKISLKPADLMPFLFKLHHSLALPRAPGALLLGTVGLLWTLDCFVGM 172
            P TG V  + D  +       L+ +   LH + A    P  LL   VGL  +    +G 
Sbjct: 306 TPATGEVLAMTDARQAGAHDV-LLNWTHPLHDASA-GGLPARLLAVLVGLAPSALLILGF 363

Query: 173 ILTWPRARP 181
           +    R RP
Sbjct: 364 MRWRQRLRP 372



 Score = 28.9 bits (63), Expect = 3e-04
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 8/54 (14%)

Query: 347 NWLGALHMGHVFGLPWRILLVLVGGAVS--------LLTVTGVVVWWKKRAARR 392
           ++ G   M  V+ L  R+LL   GGA+          L V G+  WW +R   R
Sbjct: 125 DYWGEYAMTWVYDLHHRLLLQATGGAILGWSGLAMLALMVAGLTAWWPRRGGWR 178