Pairwise Alignments

Query, 258 a.a., peptidyl-prolyl cis-trans isomerase from Herbaspirillum seropedicae SmR1

Subject, 630 a.a., PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 93.6 bits (231), Expect = 9e-24
 Identities = 57/124 (45%), Positives = 71/124 (57%), Gaps = 14/124 (11%)

Query: 133 HARHIL------VDKKEDAEA------IIAKLKAGTKFEDLA-KQSKDTGSAANGGDLDW 179
           HARHIL        K EDA A      +IA+LK G  F  LA K S D GS A GGDL W
Sbjct: 269 HARHILFMAQEGASKDEDAAARAKAEDVIAQLKKGKDFASLAAKLSDDKGSGAQGGDLGW 328

Query: 180 ATPASFVKPFSDAMVALKKGEVTPTPVQTQFGWHVIKLEDVRPAKVPTLDEVKPQIAEAL 239
            T    V PF +A  ALK GE++  PV++ FGWHVIK+E     +   LDEV+ +I + L
Sbjct: 329 FTKGQMVPPFEEAAFALKPGEIS-APVRSAFGWHVIKMEAHETQRTRALDEVRGEIRQRL 387

Query: 240 QQKK 243
            ++K
Sbjct: 388 GEEK 391



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 13/162 (8%)

Query: 101 LIADYLKKNPVSDADIKAEYDKFKAQAGDKEYHARHILVDKKEDAEAIIAKLKAGTKFED 160
           +IA  L+  P S   ++   ++  AQ   +      + V   ++A A   KL  G   E 
Sbjct: 469 MIAAVLESQPESVTPLEKVKEEVAAQV--RRIEGAKLAVKAAQEAGA---KLADGVPAEL 523

Query: 161 LAKQSKDTGSAANGGDLDWATPASFVKPFSDAMVALKKGEVTPTPVQTQFGWHVIKLEDV 220
            A+         NG    +  P    +   DA  A   G   P PV T  G  + +++DV
Sbjct: 524 AARVKTAEPFGRNG----FIAPFGQSRALVDAAFAAAPGAWQPAPVDTSSGAVLFRVKDV 579

Query: 221 -RPAKV---PTLDEVKPQIAEALQQKKLQAYQEQLRAKAKVQ 258
            RP         + V+  +  A +++  + +  +L A AK++
Sbjct: 580 QRPGDAEWSAAAETVRATVLSAKREELFRVFVGELSAAAKIE 621