Pairwise Alignments

Query, 305 a.a., formyl transferase from Herbaspirillum seropedicae SmR1

Subject, 322 a.a., methionyl-tRNA formyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  100 bits (250), Expect = 3e-26
 Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 15/236 (6%)

Query: 10  DVGVRCLKVLLARGVQVSLVVTHEDSAT---ENIWFGSVAGVCREHGIACITPADPKSPQ 66
           D  V  L+ L+  G  V  V+T  D        I +  V     E  +  + P   K   
Sbjct: 15  DFAVEALRQLVEGGYNVVGVITMPDKPAGRGHKIQYSPVKQYALEQNLPLLQPEKLKDEA 74

Query: 67  LLAQVQAAQPDFIFSFYYRHMLPVEVLAAAKRGAYNMHGSLLPKYRGRVPINWAVLHGET 126
            +  ++  + D      +R MLP  V    + G +N+H SLLP+YRG  PINWAV++G+T
Sbjct: 75  FVQALREWKADLQIVVAFR-MLPEVVWNMPRLGTFNLHASLLPQYRGAAPINWAVINGDT 133

Query: 127 ETGATLHEMTVKPDAGAIVAQTSVPILPDDTAHEVFGKVVVAAELTLWNVLPAMLSGRT- 185
           ETG T   +  + D G ++ Q  VPI   D    V  K+++     +   + A+L+    
Sbjct: 134 ETGITTFFLQHEIDTGKVIQQVRVPIADTDNVEVVHDKLMILGGKLVLETVDAILNDTVK 193

Query: 186 PSMPNDLSKGSYYGGRKP------EDGRIDWRRTAREVHNLVRAVAPPYPGAFEEI 235
           P    D+   +  G  +P      E  RIDW    ++V++ +R ++ PYP A+ E+
Sbjct: 194 PIAQEDM---AVVGELRPAPKIFKETCRIDWNSPVKKVYDFIRGLS-PYPAAWSEL 245