Pairwise Alignments

Query, 391 a.a., flagellar biosynthesis protein FlhB from Herbaspirillum seropedicae SmR1

Subject, 382 a.a., flagellar type III secretion system protein FlhB from Pantoea sp. MT58

 Score =  336 bits (862), Expect = 6e-97
 Identities = 175/371 (47%), Positives = 249/371 (67%)

Query: 4   DSDMERTEPATGKRIERAREQGDVPRSRELATCLVLLVGGSCVWMFSGPVVTSLDRIMVA 63
           DSD ++TE  T  R+E+ARE+G +PRSREL + L+LL G   +WM    +   L  ++  
Sbjct: 3   DSDEDKTESPTAHRLEKAREEGQIPRSRELTSVLMLLAGIMILWMGGNMMAHRLAAMVAT 62

Query: 64  MMSLERAAIYDPVVLMNLISARCLDVAIAVIPLAFLMTLAAMAAPLTLGGWLFNVSSLAP 123
            +  +   + D  ++++ I +      +A++PL   + L A+AAP+ LGG +F+  S+  
Sbjct: 63  GLRFDHGMVRDDKIIVSHIGSLITQALMALLPLMGGLVLVAIAAPMLLGGIVFSGKSIKF 122

Query: 124 KFSKLNPISGFANMFSVNSLVELGKAVLKTLLVGTVAWVTIRSQLDAVMGLGVESLKTAG 183
              K+NPI+GF  MF+  +  EL K +LKT+LVG V W  I S    ++ L  E+  TA 
Sbjct: 123 DPKKMNPIAGFKRMFAAQAWTELFKGILKTILVGAVGWWYIWSHWPEMLRLISEAPVTAL 182

Query: 184 AHAAQLLWISFITMVSALIFIAVLDVPYQLWNYGRKLRMTREEVKQEHKESEGDPHIKGK 243
            H  +++ +    ++  LI +   DV +QL+++ +KL+M+ +E++ EHK+ EGDPH+KG+
Sbjct: 183 IHGMEMIAVCCSLVMLGLIPMVGYDVFWQLYSHFKKLKMSMQEIRDEHKQQEGDPHVKGR 242

Query: 244 IRAMQRAMARRRMMAEVPTADVVVTNPTHYAVALKYSEGKMGAPKVVAKGSDEIAAKIRE 303
           IR   RA ARRRMMA+VP ADV+VTNPTHY+VAL+Y+E KM APKVVAKG+ EIA +IRE
Sbjct: 243 IRQQMRAAARRRMMADVPKADVIVTNPTHYSVALQYNEKKMSAPKVVAKGAGEIALRIRE 302

Query: 304 LAREHRVPLLEAPPLARALHTHTEIGDEIPEALYTAVAEVLAYVFQLRTYGQFGGTRPVE 363
           LA EHR+P+LEAPPLARAL+ HTEIG  IP ALY AVAEVLA+V+Q R + + GG  P +
Sbjct: 303 LAAEHRIPVLEAPPLARALYRHTEIGQHIPGALYAAVAEVLAWVWQSRRWKREGGLIPTK 362

Query: 364 PTGLEVPKELD 374
           P  L VP E+D
Sbjct: 363 PKDLPVPAEMD 373