Pairwise Alignments

Query, 749 a.a., GTP pyrophosphokinase from Herbaspirillum seropedicae SmR1

Subject, 774 a.a., bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase from Bifidobacterium breve UCC2003

 Score =  425 bits (1092), Expect = e-123
 Identities = 260/740 (35%), Positives = 400/740 (54%), Gaps = 80/740 (10%)

Query: 45  SGQNALQFSISVATVLTALNVDAATRIAALAFEAQMLHPELEE------KLEERFGKEIA 98
           SG+  +   ++V+ +L  L +        +   A +LH  +E+      +    FG  +A
Sbjct: 63  SGEPYIIHPLAVSQILADLGM------GPIVVAAGLLHDTVEDTDYTLDQCRAEFGDTVA 116

Query: 99  DLVGNVRQLMRFHSFSFQPQQEVLRGKNAAQQAAAQIETLRKMLLAMATDMRAVLVRLAS 158
            LV  V +L          Q EV          +AQ ET+RK+++AM+ D+R ++V+LA 
Sbjct: 117 GLVDGVTKLS---------QLEV--------GDSAQAETIRKLVVAMSRDVRTLVVKLAD 159

Query: 159 RVATLRYFAETKQEDEASANYARQTFELYAPLANRLGIWQLKWELEDLSFRFLEPVTYKR 218
           RV   R +   K    ++   AR+T ++YAPLANRLG+  +K ELE+LSF+ L P  Y  
Sbjct: 160 RVHNARTWRYVKTT--SAQKKARETLDVYAPLANRLGMNAIKTELEELSFKVLYPKIYNE 217

Query: 219 IAKMLEEKRLEREAFVANAIARLRAEMAAQDIRAEVSGRPKHIYSIWNKMRGKHIDFSEL 278
           I  ++  +  +R+ ++   +A +  ++  Q I+A V+GRPK  +SI+ KM  +  DF+ +
Sbjct: 218 IVVLVARRAGQRDVYLKQILAEINEDLDEQHIKAYVTGRPKDYFSIYQKMIVRGHDFANI 277

Query: 279 YDVRAFRVIVDDVKTCYAVLGIVHDIWTPIPEEFDDYISRPKQNGYQSLHTVVTAEDGRA 338
           YD+   R+IVD ++ CYA LG VH  W P+P  F DYI+ PK N YQSLHT V    G+ 
Sbjct: 278 YDLVGVRIIVDTIQDCYAALGAVHARWNPVPGRFKDYIAMPKLNMYQSLHTTVVGPGGKP 337

Query: 339 LEVQIRTHEMHHFAEYGVAAHWRYKESGGSN---FSAQKYDEK-------------IAWL 382
           +E+QIRT +MH  AE+G+AAHW+YKE+G +     S  K D K             + W+
Sbjct: 338 VEIQIRTWDMHRRAEFGIAAHWKYKENGQAGRALSSPDKSDRKRDVNNQELSEADNLKWI 397

Query: 383 RQLLAWKNEVTDAVVDQEEVRRDWVEKLKSATLDERIYVLTPQARVIELPSGATPIDFAY 442
           +QL  W +E  D+         +++  LK       +YV TP+ +++ LP+ ATP+DFAY
Sbjct: 398 QQLADWTSETPDS--------NEFLGSLKEDLGSSEVYVFTPKGKIVSLPAHATPVDFAY 449

Query: 443 HLHSDVGHRCRGARVDGVMVPLNTALKNGQTVEIITVKSGPGVGPSRDWLSPDYAVSSRT 502
            +H++VGHR  GARV+G +VPL+T L NG TVEI+T KS    GPSRDWLS  +  S + 
Sbjct: 450 AVHTEVGHRTMGARVNGRLVPLDTTLDNGDTVEILTSKSDT-AGPSRDWLS--FVKSPKA 506

Query: 503 RSKIRAWFNAIEQQETLSVGRGLLEKTLQREG------KTAVNLEELAQKLGFAKVDDLC 556
           R+KIR WF+   + E +  GR  L + +++         T   L  +A  L F   D + 
Sbjct: 507 RNKIRQWFSKERRTEAIEEGRDELTRAMRKRNLPVNALLTTEALIGVADDLNFPNADAVF 566

Query: 557 LSLAKEEFSLRHVEQALHE---GQEKKPEIDDETL----ITRKSRASSIVQGAKSGVLVV 609
            ++   + S ++V   L +     E   E++ E L    + RKS +SS      +GV V 
Sbjct: 567 AAIGDGQISTQNVISHLVKDAGADEVDEEVEQEALPLKPVERKSSSSS------TGVSVK 620

Query: 610 GTDGLLTQLARCCKPAPPDAIAGFVTRGKGVSIHRVSCKNFAEMSSHAPERVIQTTWGAP 669
           G   +  +LARCC P P D I GF+TR +GVS+HR  C+N  ++ +  PERV++  W   
Sbjct: 621 GVGDVWVKLARCCMPVPGDQIIGFITRNQGVSVHRTDCQNMIDLKNKQPERVVEVEW--T 678

Query: 670 ARETVYPVDIFVLASDRQGLLRDISDIFLRDKINVI-GVSTQSVKGHARMAFTAEIGSTE 728
           + + ++ V I V A DR+ LL D++ +     +N+I G         A   F+ E+   +
Sbjct: 679 STKGLFMVKIQVEALDRRNLLSDVTRVLSDHGVNIISGTIATGSDRVATSQFSFEMADPQ 738

Query: 729 QLQKALTVIREVKGVIEAKR 748
            L   L  +R++ GV +  R
Sbjct: 739 HLNTLLAAVRKIDGVFDVYR 758