Pairwise Alignments

Query, 413 a.a., 3-oxoacyl-ACP synthase from Herbaspirillum seropedicae SmR1

Subject, 413 a.a., beta-ketoacyl synthase (RefSeq) from Shewanella loihica PV-4

 Score =  534 bits (1376), Expect = e-156
 Identities = 250/406 (61%), Positives = 322/406 (79%), Gaps = 2/406 (0%)

Query: 6   ERRVVITGLGCISPVGNNVADTWSAIKEGKSGIATVTKFDATPFTTHFAGEVKGFNIEDY 65
           +RRVV+TG+G ++PVGN V  +W A+  G+SGIA +TKFDA+ F+T F+G VK F++E Y
Sbjct: 3   KRRVVVTGIGLVTPVGNTVEASWKALLAGQSGIAPITKFDASEFSTRFSGSVKDFDVEQY 62

Query: 66  IPAKEARHMDTFIHFGMAAGIQAMQDSGLTVTDENAERIGVMIGSGIGGLPLIEETHAEL 125
           +P KEAR MD FI +GMAAGIQA+QD+GL +  E+  R+G  IG+G+GG+PLIE  H+ L
Sbjct: 63  LPKKEARKMDLFIQYGMAAGIQAIQDAGLNMEVEDPTRVGTAIGAGMGGMPLIEAAHSAL 122

Query: 126 TNRGPRRISPFFIPASIINMISGNLSIKFGLKGPNLAIVTACTTGLHCIGSAARMIMYGD 185
              GPR+ISPFF+P++IINMI+G+LSIK+G+ GPN A+ TACTTG+H IG AAR I YGD
Sbjct: 123 LKGGPRKISPFFVPSTIINMIAGHLSIKYGMTGPNFAVTTACTTGVHNIGFAARTIAYGD 182

Query: 186 ADVMVAGGAESSVSPLGIGGFASARALSTRNDDPATASRPWDKDRDGFVLGEGAGVMVLE 245
           ADVM+AGGAE    PL +GGF SA+ALSTRN+DP  ASRPWDKDRDGFV+G+GAG+MV+E
Sbjct: 183 ADVMIAGGAEDVTCPLAVGGFGSAKALSTRNEDPVAASRPWDKDRDGFVIGDGAGIMVME 242

Query: 246 EYEHAKARGAKIYAELLGFGMSGDAYHMTAPNLDGPRRCVL--NALRDAGVNPDEVQYLN 303
           EYEHAKARGA IY EL+GFGMSGDA+HMT+P  DG    +   NA++DA ++   V Y+N
Sbjct: 243 EYEHAKARGATIYGELVGFGMSGDAFHMTSPPADGAGAALAMENAIKDAAIDKQLVGYIN 302

Query: 304 AHGTSTPLGDKNESDAIKAAFGDHAYKMVVNSTKSMTGHLLGGAGGLETVLTVLAVHNQV 363
           AHGTSTP GDK E+ A+K+ FGDHAY ++V+STKSMTGHLLG AG +E ++T+LA+ +Q+
Sbjct: 303 AHGTSTPAGDKAEASAVKSVFGDHAYNLLVSSTKSMTGHLLGAAGAVEAIITLLALRDQM 362

Query: 364 SPPTMNIFNQDPECDLDYCANQARDMKIDIAVKNSFGFGGTNGTLV 409
            PPT+N+ N D  CDLD+  + AR    D A+ NSFGFGGTNG+L+
Sbjct: 363 IPPTINLDNPDEGCDLDFVPHTARSHAFDYALCNSFGFGGTNGSLL 408