Pairwise Alignments

Query, 237 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 203 a.a., outer membrane lipoprotein carrier protein LolA (RefSeq) from Shewanella amazonensis SB2B

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 11/189 (5%)

Query: 50  AAALDQFKQFVSST---QSAKGAFTQRMVRTENGATKVVNTSSGSFVFSRPGKFIWTYQK 106
           A   D  K+ VS     Q  K  F+Q+ V  +NG  K++   SG     +P  F W    
Sbjct: 16  AVFADDAKELVSKLDVMQGIKANFSQK-VTDQNG--KLIQEGSGVIAMHQPDAFYWHLTA 72

Query: 107 PYEQVIQADGEKLFIYDKDLNQVTTKKLGNALGSSPAAILFGSNDLEKN-FTLKEAGDKD 165
           P E +I A    +++Y+    +V+   + + L +SP A+L   ++   N + +   G   
Sbjct: 73  PDESLIVAKDNSVWVYNPFAEEVSILDMEDILKASPMALLVHRDEKRWNEYQIDRKGSCF 132

Query: 166 GLEWLEAVPKSKDTTFDRIGIGLKNGTPVAMELHDSFGQVSLLSFDSFEKNPPLKVNSFS 225
            +   + V  + DT    + +   N T   + L D+ G  S  S            + F 
Sbjct: 133 DITPRQGVESAVDT----VSVCFANNTLSDIRLTDAQGSTSHFSLSEQAAVTDADESLFQ 188

Query: 226 FTIPKGADV 234
           F IP G  +
Sbjct: 189 FQIPDGVSI 197