Pairwise Alignments

Query, 237 a.a., membrane protein from Herbaspirillum seropedicae SmR1

Subject, 233 a.a., outer membrane lipoprotein carrier protein LolA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 62.4 bits (150), Expect = 7e-15
 Identities = 53/220 (24%), Positives = 101/220 (45%), Gaps = 11/220 (5%)

Query: 19  TLRRRLMAAGLSALVVAGAITITALTPGRASAAALDQFKQFVSSTQSAKGAFTQRMVRTE 78
           +LR      GL+AL  A A++     P RA+    ++ +Q   +T + K  FTQ ++  E
Sbjct: 6   SLRAFYRLLGLAALCAAMALSAA---PARAAGELTNRLQQRYDATTTLKADFTQVLLHRE 62

Query: 79  NGATKVVNTSSGSFVFSRPGKFIWTYQKPYEQVIQADGEKLFIYDKDLNQVTTKKLGNAL 138
           +GA +   T  G+  F +P    W  + P+ +++     +++ Y  D  +V  K     +
Sbjct: 63  SGARE---TRQGTLQFRKPLLVRWETKAPHAELLVVTAAEIWNYLPD-EEVAYKYPVELV 118

Query: 139 GSSPAAI--LFGSNDLEKNFTLKEAGDKDGLEWLEAVPKSKDTTFDRIGIGLKNGTPV-- 194
             S + I  + G   LE++F + E  D +G+  L   PK          + +   T +  
Sbjct: 119 QDSRSIIKVITGQAKLEQDFDVAEEADDNGMARLHMYPKEPTPQLTEAFLWVDPNTNLIR 178

Query: 195 AMELHDSFGQVSLLSFDSFEKNPPLKVNSFSFTIPKGADV 234
             ++ D +G  + ++ +S   +  ++ ++F F  PKG DV
Sbjct: 179 RAKIIDFYGNENNITLNSLATDAGVQDSAFRFAPPKGVDV 218