Pairwise Alignments

Query, 220 a.a., DNA mismatch repair protein MutS from Herbaspirillum seropedicae SmR1

Subject, 186 a.a., endonuclease SmrB from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 59/180 (32%), Positives = 90/180 (50%), Gaps = 16/180 (8%)

Query: 43  EEANLFRNSIGQIAPLRSKAIDKALHLPDAPLPIPRQHLADEQAALLESLSDEFTIDTLM 102
           ++ +LFR+ +  +  LR    D  LH P+   P  ++    E+ A   S +D +  D  M
Sbjct: 20  DDFSLFRDEVKGVKKLRQ---DTILHAPNRN-PKQKEIRRTEREA---SDNDFYFSDEFM 72

Query: 103 D--SDENLS-FARPGVGMDVLSKLRRGNWVIQAQLDLHGYRRDQAREALGEFLRQSRRRG 159
              +DE  + +AR  V    + +LRRG +V    LD+HG  + +A+  LG  +    +  
Sbjct: 73  PHLTDEGPTRYARSDVSKYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIAYCLKEN 132

Query: 160 LRCVRVIHGKGLGSVNKEPVLKHKVRNWLAQKDEVMAFCQARAADGGAGALVVLLKSSER 219
           + C  V HG G      + +LK  V  WLAQ  +V+AF QA    GG GAL+VLL   E+
Sbjct: 133 VHCACVQHGIG------KHILKQNVPLWLAQHPDVLAFHQAPLEFGGDGALLVLLSIPEK 186