Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 834 a.a., Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component from Pseudomonas stutzeri RCH2

 Score =  531 bits (1368), Expect = e-155
 Identities = 316/839 (37%), Positives = 481/839 (57%), Gaps = 30/839 (3%)

Query: 5   ALRMTWRDWRTGELRFLLIALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGADLLVAADQ 64
           A R   RD R GELR L  AL+VAVA+ +++G+F  R+   M   A + LGAD++++   
Sbjct: 13  AYRQLLRDARAGELRVLFFALVVAVAASTAIGYFGARLNDAMLLRASEFLGADMVLSGSA 72

Query: 65  PLPPQWMQRAAAQGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTAGYPLRGQLRLQTA 124
           P  P+ ++      L  AQ   F S+  A E D     LAS+KA ++ YPLRG LR    
Sbjct: 73  PASPEQIEAGKQLDLDHAQVVEFSSVI-ATEQDLQ---LASVKAASSSYPLRGTLRSAAQ 128

Query: 125 S-GADRPAEGIPQPGTVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRGSAFVN 183
              A++P +G P PG  W + ++ + L++++GD++++G   L++  V+  EPDR   F +
Sbjct: 129 PYEAEQPGQG-PAPGEAWAEARLFAALELQIGDSIEVGSKLLRLTRVLTYEPDRVGDFYS 187

Query: 184 FAPRVMLGEADLAATHLVQVGSRVTYRLLLAGPAPVVKQFQQELERQIEADKLRGVRLES 243
             PRV++   DL AT +VQ GSRV YR L  G    +  +QQ ++  ++A +    R+E+
Sbjct: 188 LTPRVLMHLDDLEATGVVQPGSRVRYRELWRGETATLAAYQQSIQAGLQAHQ----RIET 243

Query: 244 LENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGLTQA 303
             +   ++   L RAE++L+L  L + +LA +AVA++A RF  R  DA A+LRC GL++ 
Sbjct: 244 ANDSNRQIGGALGRAERYLNLASLAAILLAGVAVALSAARFATRRFDASALLRCLGLSRN 303

Query: 304 QVTRLYLGEFMLVGLAASVLGMLIGYAAHFALLQWLGNFMPTALPPAGWQPAVQGVAAGL 363
               LY  +  ++G+ AS+ G L+G+AA   L   L + +   +PP G  PA  G+A GL
Sbjct: 304 DALLLYTLQLAMLGVLASLAGALLGWAAQHGLFFLLRDLLAQEIPPGGVWPAAAGIATGL 363

Query: 364 LLLLGFALPPILQLRNVPHNRVIRRDQLTPQPLTVATYGLGTLVFS-GLLLWQAG-DLKL 421
           + L GFALPP+  L  VP  RV+RRD L   P     YG  T +F+ GL++W+   DLK+
Sbjct: 364 VALAGFALPPLAALGRVPPLRVLRRDMLPVPPSAWLVYG--TAIFALGLIMWRLSLDLKI 421

Query: 422 GLLTIAGFLGGFGLFA--LVAWLCLRALRSLRGLVDRQS--WRFAIDGLQRRPAAAVMQV 477
            L  + G     GL A  L+  L L  L+ +R L+   S  WR  +  L R P AA  Q 
Sbjct: 422 TLALLGG-----GLLATLLLGGLLLLGLKGMRRLLAGASLSWRLGLGQLLRHPLAAAGQA 476

Query: 478 VALGLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVEQLLRQGGVGDV 537
           +A GL L+A+ L+ ++RG+L+  W+   P +APN F++N+ P ++ A  + +        
Sbjct: 477 LAFGLILLAMALIALLRGELLDTWQDQLPDNAPNHFVLNVLPAEKDAFAERIAALSNHAA 536

Query: 538 ALYPMIRGRLVQINGRAISAADYAEDRAKRLVDREFNLSTLREIPPGNGIVAGRWYDDRQ 597
           +LYP++ GRL+ IN   +      E + +R + R+ +L+   ++P  N +VAG+W+ +R+
Sbjct: 537 SLYPVVPGRLISINDEPVRQLVSKESQGERAIRRDLSLTWAADLPKDNHLVAGQWWTERK 596

Query: 598 ----PEASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPT 653
               P  SVE  LA++L +KLGDRL F I G   EA VTSLR++ W S + NF++I  P 
Sbjct: 597 ATDLPGVSVEAELAESLQLKLGDRLSFTIGGLTREASVTSLREVNWDSFQPNFYMIFEPD 656

Query: 654 LMRDTPQSWITAVHLNPQQEALGNTLTRDYPNLTVVDIGSVLRQIQDVVGQVISAVEFLF 713
            +   P +++T+ HL P +E     L R +P++T++ + ++L Q++ ++ QV  AVE++ 
Sbjct: 657 TLEGMPATYMTSFHLPPGKERELVELARAFPSVTLLQVEALLAQLRSILAQVSLAVEYVL 716

Query: 714 LFTLCSGVLVLYAALAGSQDERVREAGLLRALGATRVELARAQRIEVLLVGALAGLLAAS 773
           LF L +G+ VL+A L  + DER+R+  LLRALGA R  L RA+R E  L+GA +GLLAA 
Sbjct: 717 LFVLAAGLAVLFAGLQATLDERIRQGALLRALGAERRLLLRARRAEFGLLGAASGLLAAL 776

Query: 774 GAAAIGWALAHYVFNFDWSFSPLVWLAGMSL-GAACSALGGWAGLRHVLRRPPLQTLRE 831
           G   +   L HY F+  W   P  WL  + L GA      G  G R  L   PL  LRE
Sbjct: 777 GCELVSALLYHYAFDLRW--QPHPWLLVLPLIGALLVGGAGLIGTRRALNASPLTVLRE 833