Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  303 bits (777), Expect = 2e-86
 Identities = 228/825 (27%), Positives = 404/825 (48%), Gaps = 50/825 (6%)

Query: 3   QQALRMTWRDWRTGELRFLLIALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGADLLVAA 62
           ++ LR +  + R G+L  + +AL + +AS+ ++     RM   + +     L AD +  +
Sbjct: 11  RRLLRWSLSEIRHGQLWPVTVALTLIIASIFALTALAQRMEQVIVKQGRDALTADTVFVS 70

Query: 63  DQPLPPQWMQRAAAQGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTAGYPLRGQLRLQ 122
             PLP   +   A Q  Q +Q   F +MA + +G      L ++KAV + YPLRG++RL 
Sbjct: 71  GNPLPESLLTLTAQQASQTSQMTRFATMAFSDQG----MQLVTVKAVDSAYPLRGEMRLS 126

Query: 123 TASGADRPAEGIPQPGTVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRGSAFV 182
                            +W++P++  QL V +GD + +GD    ++  +  EP  G +F 
Sbjct: 127 DGQQTFNHVAS----NQLWLEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEP--GLSFN 180

Query: 183 NFA--PRVMLGEADLAATHLVQVGSRVTYRLLLAGPAPVVKQFQQELERQIEADKLRGVR 240
            F   P V +  +D+  T  +Q GSRV + L + G    ++  +Q++     +D+ R   
Sbjct: 181 PFQQMPSVYIHASDVDKTGAIQPGSRVQFSLFMTGDDSAIESIKQQVSLTA-SDRWRDQE 239

Query: 241 LESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGL 300
             S  N         +R +Q+LSL   +  ++AA  + +  + ++       AML+  G 
Sbjct: 240 SGSRTN------EVFERTQQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGA 293

Query: 301 TQAQVTRLYLGEFMLVGLAASVLGMLIGYAAHFALLQWLGNFMPTALPPAGWQPAVQGVA 360
           ++  + R    +  L+ + A VLG +IG      L   L + +P  LP  G +P    +A
Sbjct: 294 SRRWLRRWLALQVGLLLVFAVVLGSVIGVGLESLLRLPLKDLLPDPLPSYGLRPLWIALA 353

Query: 361 AGLLLLLGFALPPILQLRNVPHNRVIRRDQLTPQPLTVATYGLGTLVFSG-------LLL 413
           +  L+ +     P+ +L +V    V+       QP+T  T     L+          L+ 
Sbjct: 354 SSFLIAVPALGIPLGRLLSVSAVAVM-------QPVTAQTRWQRNLLLIMVPIVPLLLVY 406

Query: 414 WQAGDLKLGLLTIAGFLGGFGLFALVAWLCLRALRSLRGLVDRQSWRFAIDGLQRRPAAA 473
           WQ   + + L+ I        LFA++A + +   R L  L    +   A+  + R  AA+
Sbjct: 407 WQNQLIWIVLIGIVV------LFAMLAVVSVLVTRLLAKLPLNPAMALALSRINRSGAAS 460

Query: 474 VMQVVALGLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQRQAVEQLLRQGG 533
            +Q  AL L LM L ++ ++R DL+  W++  P +APN F +NI   ++ +    L    
Sbjct: 461 GLQFGALALSLMLLAIIWLVRTDLLSDWQRTLPENAPNAFALNISESEKASYLAALDTAS 520

Query: 534 VGDVALYPMIRGRLVQINGRAISAADYAE--DRAKRLVDREFNLSTLREIPPGNGIVAGR 591
           +   A YP++RGRL  ING+   A  YA+  + +   + RE NL+   ++P  N I+ G 
Sbjct: 521 IERSAAYPIMRGRLTHINGQ--EAKQYAQNGEESSDALRRELNLTWAEQLPDYNPILQGE 578

Query: 592 WYDDRQPEASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILN 651
           W    Q   SVE+ +A  LG+KLGD L F I  Q V A V ++R++EW  ++ NF+ I +
Sbjct: 579 WQS--QNGVSVEQEVASDLGLKLGDTLTFMINSQTVSAQVNTIRQVEWREMKPNFYFIFS 636

Query: 652 PTLMRDTPQSWITAVHLNPQQEALGNTLTRDYPNLTVVDIGSVLRQIQDVVGQVISAVEF 711
           P ++++ P S++ +  + P+ +AL   L+R +P ++++DI ++  +IQ ++ Q++ +V  
Sbjct: 637 PDVVQNLPVSYLISFRIQPEHDALLGQLSRQHPTVSLMDIRTMGAKIQALLTQIVWSVTV 696

Query: 712 LFLFTLCSGVLVLYAALAGSQDERVREAGLLRALGATRVELARAQRIEVLLVGALAGLLA 771
           L    + +GVL+++  L  S  +R +E  L R LGA+R  +      E  ++  + GL+A
Sbjct: 697 LAALGVLAGVLLIFTLLRLSLSQRQQEIRLYRTLGASRRRVMHTIWAEYGVMALVGGLVA 756

Query: 772 ASGAAAIGWALAHYVFNFDWSFSPLVW-----LAGMSLGAACSAL 811
           +  A A+  A+  + F+   S    +W     L   +L A  S+L
Sbjct: 757 SVSADAVVAAVMKWGFSLTPSLHMALWFVLPALTFCTLAAVVSSL 801