Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 417 a.a., ABC transporter permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 33/200 (16%)

Query: 603 ERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVI-------LNPTLM 655
           E+G +   G+K+G         Q+     T+L+K+++  L      I       ++P+L 
Sbjct: 200 EKGKSAIEGVKVGGE-----RNQVFIPLATALKKMQFKPLEDELDTIKFALKEGIDPSLA 254

Query: 656 RDTPQSWITAVHLNPQQEALGNTLTRDYPNLTVVDIGSVLRQIQDVVGQVISAVEFLFLF 715
             + +  ++  H N Q          DY  +   D+ +  ++ Q +   V++ V  + L 
Sbjct: 255 AKSVEHLLSRRHGNEQ----------DYDIVVPADLLAQHQRTQQIFNIVMACVAGISL- 303

Query: 716 TLCSGVLVLYAALAGSQDERVREAGLLRALGATRVELARAQRIEVLLVGALAG------- 768
            L  G+ ++   LA    ER  E GLLRALGAT+ ++AR   IE +++ A  G       
Sbjct: 304 -LVGGIGIMNIMLATIL-ERTSEIGLLRALGATQKDIARQFLIESMVISATGGLIGIGVG 361

Query: 769 -LLAASGAAAIGWALAHYVF 787
            LLA   +AA GW +A  VF
Sbjct: 362 LLLALVISAAAGWPVAWSVF 381