Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 847 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

 Score =  291 bits (744), Expect = 1e-82
 Identities = 250/843 (29%), Positives = 393/843 (46%), Gaps = 54/843 (6%)

Query: 5   ALRMTWRDWRTG--ELRFLLIALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGADL-LVA 61
           ALR   R+ R G    R L+  L + VA++++ G     +  G++ +A QLLG DL L  
Sbjct: 12  ALRFALRELRAGLSGFRVLIACLAIGVAAIAAAGSVNRAIDEGLSANARQLLGGDLELRL 71

Query: 62  ADQPLPPQWMQRAAAQGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTAGYPLRGQLRL 121
             + L    +      G     T++  +M +       R +L  +K V  GYPL G + L
Sbjct: 72  MYRDLSAAEIATLERLGTLTRYTEM-RAMVRPETNAEGRRLLVEMKGVEPGYPLYGAVEL 130

Query: 122 ---QTASGADRPAEGIPQPGTVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRG 178
              Q  +GA    +G+   G V   P +  +L ++VGD L++GD  +++  VIA EPD  
Sbjct: 131 TDGQPLAGALAERDGLA--GAV-AAPALADRLGIKVGDRLRVGDAVVELRGVIAREPDAI 187

Query: 179 SAFVNFAPRVMLGEADLAATHLVQVGSRVTYR--LLLAGPAPVVKQFQQELERQIEADKL 236
               +F PR+M+    +A T L+Q GS V Y   L L G + + +          +A   
Sbjct: 188 GGAFSFGPRLMVAAPTVAKTGLIQPGSLVEYHGLLRLEGGSDLARAKDILAAEHPQA--- 244

Query: 237 RGVRLESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLR 296
            G RL   E      +  LDR   FL LVGL S ++  + VA A + ++   +   A+L+
Sbjct: 245 -GWRLRGPEEAGAGAQRFLDRLTLFLVLVGLTSLLVGGIGVANAVKAYLDGRIRTIAVLK 303

Query: 297 CFGLTQAQVTRLYLGEFMLVGLAASVLGMLIGYAAHFALLQWLGNFMPTALPPAGWQ-PA 355
           C G     + R+Y+ +  L+ LA   +G+LIG A     +  L + +P       +  P 
Sbjct: 304 CLGAPAGLIFRVYMIQIGLISLAGVGIGLLIGAALPPLAIALLADLLPVPAEAGVFAGPL 363

Query: 356 VQGVAAGLLLLLGFALPPILQLRNVPHNRVIR-----------RDQL--TPQPLTVATYG 402
           +   A GLL  L F+L  + + R++P   + R           RD+L      LT+A   
Sbjct: 364 LLAAAFGLLTALVFSLGALSRARDIPATALFRGESAKGRGGRWRDRLMIAAGALTLAALA 423

Query: 403 LGTLVFSGLLLWQAGDLKLGLLTIAGFLGGFGLFALVAWLCLRALRSLRGLVDRQSWRFA 462
           + T     L  W      L LL   G     GL A       +A     GL    + R A
Sbjct: 424 VATADDKPLAAWFVAGAGLALLLFRGAAALVGLLA-------KAAGRPSGL---PALRLA 473

Query: 463 IDGLQRRPAAAVMQVVALGLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQR 522
           +  L R  AA    V++LGLGL  L+ + +I+G+L    R+  PA AP  F I+IQP Q 
Sbjct: 474 LTNLHRPGAATTSVVLSLGLGLSVLVAIALIQGNLDRQIREGIPAQAPTFFFIDIQPQQT 533

Query: 523 QAVEQLLRQGGVG-DVALYPMIRGRLVQINGRAISAADYAEDRAKRLVDREFNLSTLREI 581
              E  +     G  V L  MIRGR+   NG  ++    A + A+  V  +   ST   +
Sbjct: 534 ATFEAAVHGADPGAKVVLADMIRGRIRAFNGVPVAEERIAPE-ARWAVRGDRGFSTAETL 592

Query: 582 PPGNGIVAGRWYD-DRQ--PEASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLE 638
           P G+ + AG W+  D Q  P  S+   LA+ +G+  GD +  +I G+ +   + + RK++
Sbjct: 593 PEGSTLQAGAWWPADYQGPPLFSLTSDLAEGMGLAPGDAVTVNILGRDLTGTLANTRKVD 652

Query: 639 WGSLRVNFFVILNPTLMRDTPQSWITAVHLNPQQEALGNTLTRDY----PNLTVVDIGSV 694
           WGSL +NF  +++P      P+S+I  V  +   EAL + + +      PN++ + +   
Sbjct: 653 WGSLTMNFAFVVSPGAFAGAPRSYIATVRAS---EALASDVDKAVAAVLPNVSAIRVRDA 709

Query: 695 LRQIQDVVGQVISAVEFLFLFTLCSGVLVLYAALAGSQDERVREAGLLRALGATRVELAR 754
           L  +  ++    +AV    L TL +G +VL  A A +   R+REA  L+ LGATR ++ R
Sbjct: 710 LDTVTAIMEGAGNAVRISALLTLIAGAVVLGGAFAANHGRRLREAVTLKVLGATRGQILR 769

Query: 755 AQRIEVLLVGALAGLLAASGAAAIGWALAHYVFNFDWSFSPLVWLAGMSLGAACSAL-GG 813
           A   E  ++G   GL+AA   +   W +  +    DW   P V +A  ++G   + +  G
Sbjct: 770 AYLTEYGILGLATGLIAALVGSVAAWGVLVFALRADWVLLPGV-VATTAVGCVLATMAAG 828

Query: 814 WAG 816
            AG
Sbjct: 829 LAG 831