Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 393 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

 Score = 64.7 bits (156), Expect = 9e-15
 Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 18/256 (7%)

Query: 588 VAGRW----YDDRQPEASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLR 643
           V G W    +DDR   A + R LA+++ +K+GD +      +  +  VT    ++ G   
Sbjct: 141 VEGSWIGVAFDDRN--AMIGRRLAESMALKVGDGVTLLNRAEGQQTRVTIKGIIDAGDQE 198

Query: 644 VNFFVILNPTLMR------DTPQSWITAVHLNPQQEALGNTLTRDYPNLTVVDIGSVLRQ 697
            +   +  P   R          + ++ V   P+ +AL  T+TR++P+++   I  + + 
Sbjct: 199 DDQIFVALPLAQRLLGLAGRADFAMLSVVAQGPEADALAATMTREFPDVSARPIRKISQS 258

Query: 698 IQDVVGQVISAVEFLFLFTLCSGVLVLYAALAGSQDERVREAGLLRALGATR---VELAR 754
              ++G++   +  +    L    L + A L      R  E GL +ALGA     V    
Sbjct: 259 DGQILGKIDGLMALVAATILVITTLCVNATLTAMVARRTPEIGLQKALGADNRAIVAQVL 318

Query: 755 AQRIEVLLVGALAGLLAASGAAAIGWALAHYVFNFDWSFSPLVWLAGMSLGAACSALGGW 814
           A+   + LVG + GL+   G A +   L   VFN   +F P+V    + +    + +   
Sbjct: 319 AETTLICLVGVVLGLVIGYGLAQV---LGQAVFNAWVTFRPVVIPLTLGVSLVAALIAAV 375

Query: 815 AGLRHVLRRPPLQTLR 830
             +R  +R  P + LR
Sbjct: 376 LPVRGAVRVAPARVLR 391



 Score = 35.0 bits (79), Expect = 8e-06
 Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 10/177 (5%)

Query: 197 ATHLVQVGSRVTYRLL-LAGPAPVVKQFQQELERQIEADKLRGVRLESLENGRPEMRATL 255
           A  L+ +  R  + +L +    P        + R+      R +R  S  +G+      L
Sbjct: 209 AQRLLGLAGRADFAMLSVVAQGPEADALAATMTREFPDVSARPIRKISQSDGQ-----IL 263

Query: 256 DRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGLTQAQVTRLYLGEFML 315
            + +  ++LV     ++  L V       + R      + +  G     +    L E  L
Sbjct: 264 GKIDGLMALVAATILVITTLCVNATLTAMVARRTPEIGLQKALGADNRAIVAQVLAETTL 323

Query: 316 VGLAASVLGMLIGYAAHFALLQWLGN----FMPTALPPAGWQPAVQGVAAGLLLLLG 368
           + L   VLG++IGY     L Q + N    F P  +P       V  + A +L + G
Sbjct: 324 ICLVGVVLGLVIGYGLAQVLGQAVFNAWVTFRPVVIPLTLGVSLVAALIAAVLPVRG 380