Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 935 a.a., protein of unknown function DUF214 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  278 bits (711), Expect = 1e-78
 Identities = 253/939 (26%), Positives = 403/939 (42%), Gaps = 128/939 (13%)

Query: 5   ALRMTWRDWRTGELRFLLI--ALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGADLLV-- 60
           A R+  R+ R+G+ R  +    + + V ++++VG   + +RAG+ RDA  LLG D  V  
Sbjct: 10  AFRVALRELRSGQRRLAVFLGCMFLGVFAIAAVGSVSEAVRAGLARDARALLGGDASVEF 69

Query: 61  AADQPLPPQ--WMQRAAA-------QGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTA 111
           A  +P   +  W+    A       +G+ ++ T   PS    GE  A    + ++K V A
Sbjct: 70  ATQRPSDDELAWLSARGAVSQVVSLRGMARSATPNGPS----GEDTA----MVALKGVDA 121

Query: 112 GYPLRGQLRL---------------------------------QTASGADRPAEGIPQPG 138
            YPL G + L                                 QTA G  +P +G   PG
Sbjct: 122 AYPLYGAVTLDPPQPLADALRDGPAGGGPAGGDQSDGGQSAGGQTAGG--KPGDGTLLPG 179

Query: 139 TVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRGSAFVNFAPRVMLGEADLAAT 198
            V VDP +L +  VRVGD + +G    +IAA +  EPDR    + + PRV++    L  T
Sbjct: 180 VV-VDPLLLERFGVRVGDVISVGTQRFRIAAALLGEPDRVVQGITYGPRVLMSLQGLERT 238

Query: 199 HLV------QVGSRVTYRL----------------------------------------- 211
            L+      Q G+R+                                             
Sbjct: 239 GLLVPGTLLQSGARIRLPAPGKAAPDVAPDVARDAAPSATGGGASSVTAPAGPSGALSAG 298

Query: 212 ---LLAGPAPVVKQFQQELERQIEADKLR------GVRLESLENGRPEMRATLDRAEQFL 262
              + A P+P   +   E       +  R      G R+ES     P +R  LDR +  L
Sbjct: 299 GPPVAASPSPASLRSADEATVAAFVEAARTAFPDAGWRVESYSRAVPRIRNLLDRVDTDL 358

Query: 263 SLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRCFGLTQAQVTRLYLGEFMLVGLAASV 322
            L+G+ + ++  L +A A R ++   + + A L+C G   A V   YL + +L+G A  V
Sbjct: 359 MLIGIAALLVGGLGIAEAVRGYLASRMASIATLKCVGGGVATVLWTYLFQILLIGGAGIV 418

Query: 323 LGMLIGYAAHFALLQWLGNFMPTALPPAGWQ-PAVQGVAAGLLLLLGFALPPILQLRNVP 381
            G  +G A         G  +P  L  +    P ++    GL +LL F+L P+L    V 
Sbjct: 419 AGCSLGAAVPPLAAGLTGQLIPVQLDASVHAAPLLRAALLGLAILLAFSLRPLLLAGAVR 478

Query: 382 HNRVIRR------DQLTPQPLTVATYGLGTLVFSGLLLWQAGDLKLGLLTIAGFLGGFGL 435
              + R       + LTP    +   GLG  V +GL+     D +L    +AG  G F +
Sbjct: 479 PATLFRGYVAGGGNGLTPAGRVLV--GLGFAVLAGLVWLFTPDARLAWGFMAGCAGCFAV 536

Query: 436 FALVAWLCLRALRSLRGLVDRQSWRFAIDGLQRRPAAAVMQVVALGLGLMALLLLTVIRG 495
           F +VAW  LRA           S R  +  + R  A  V  V ALGLGL AL+ +  +  
Sbjct: 537 FRVVAW-GLRAGARRAPHAGNPSVRLGLASIHRPGAPTVNMVFALGLGLTALVGIAQVER 595

Query: 496 DLVGAWRQATPADAPNRFIINIQPDQRQAVEQLLRQGGVGDVALYPMIRGRLVQINGRAI 555
           +L  +  +    DAP  F IN+ PDQ    E L    GV  +   PM+RGR+V+I G  +
Sbjct: 596 NLSASLARDLSRDAPAFFFINVLPDQVAEFEALGNTPGVTRIDNAPMVRGRIVRIKGVPV 655

Query: 556 SAADYAEDRAKRLVDREFNLSTLREIPPGNGIVAGRWYD---DRQPEASVERGLAQTLGI 612
                A D A+  V  +  LS     PP   + AG W+       P  S+   LA+  G+
Sbjct: 656 QDVAVAPD-AQWAVRGDRGLSHAGTPPPDTELTAGAWWPPDYSGPPVISLSDDLARGFGV 714

Query: 613 KLGDRLQFDIAGQLVEAPVTSLRKLEWGSLRVNFFVILNPTLMRDTPQSW-ITAVHLNPQ 671
            +GD L F+I G+ V A + ++RK++W + ++ F V+  P L+   P +W +TA      
Sbjct: 715 TVGDSLTFNILGREVTATIANVRKVDWMTFQLQFAVLFAPGLLDRAPATWVVTAYGTGAG 774

Query: 672 QEALGNTLTRDYPNLTVVDIGSVLRQIQDVVGQVISAVEFLFLFTLCSGVLVLYAALAGS 731
            + L  T+T  + N+T + +  +L +++ ++ ++      +    L +G+LV+  A+   
Sbjct: 775 MDGLYRTVTAAHANVTAISMREILAEVRVLMERMGVMFRAMAGVMLATGLLVVAGAILAD 834

Query: 732 QDERVREAGLLRALGATRVELARAQRIEVLLVGALAGLLAASGAAAIGWALAHYVFNFDW 791
           +  R+ +A + +  GATR ++  A   E L  G + GL +A       WA    +    +
Sbjct: 835 RQRRIYDAVIYKVCGATRRDILLALVTEFLTTGLVTGLFSAGTGTLAAWAAVRGLLKLPF 894

Query: 792 SFSPLVWLAGMSLGAACSALGGWAGLRHVLRRPPLQTLR 830
           +  P V    ++   A + + G AG    L+  P   LR
Sbjct: 895 AVYPGVVAGTVAACVAFALVFGLAGTARALKEKPAPYLR 933