Pairwise Alignments

Query, 832 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 842 a.a., protein of unknown function DUF214 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  254 bits (648), Expect = 2e-71
 Identities = 231/848 (27%), Positives = 375/848 (44%), Gaps = 40/848 (4%)

Query: 7   RMTWRDWRTGE--LRFLLIALIVAVASLSSVGFFVDRMRAGMTRDAHQLLGAD----LLV 60
           R+  R+ R G    R  L+ L++ VA++++VG     ++ G+ R+   +LG D       
Sbjct: 8   RIARRELRGGVRGFRVFLLCLVLGVAAIAAVGSVRVAIQQGLEREGAVILGGDGQMEFTY 67

Query: 61  AADQPLPPQWMQRAAAQGLQQAQTQVFPSMAQAGEGDAARAVLASIKAVTAGYPLRGQLR 120
              +P    WM+  A   L+ ++   F SM      +     L  +KAV   YPL+G + 
Sbjct: 68  RFAEPDELAWMEENA---LEVSEIVEFRSMVVVDGPEGPERGLTQVKAVDDLYPLKGAVV 124

Query: 121 LQTASGADRPAEGIPQPGTVWVDPQILSQLDVRVGDTLKLGDLPLKIAAVIAVEPDRGSA 180
           L+ A      A G   PG V +   ++ ++ + +GDT +LG    ++ A +  EPD    
Sbjct: 125 LEPAIPLAE-ALGGEIPGAV-MQRVLIDRMGLEIGDTFRLGTQEFRLTAALEREPDSAGG 182

Query: 181 FVNFAPRVMLGEADLAATHLVQVGS--RVTYRLLLAGPAPVVKQFQQELERQIEA-DKLR 237
                P  +L    LA + L+  G+     YRL L   A +     Q LE + EA  +  
Sbjct: 183 GFGLGPTTILRTEALAESGLIGPGTLYETEYRLALPEDADL-----QALEEEAEALFRDT 237

Query: 238 GVRLESLENGRPEMRATLDRAEQFLSLVGLLSAMLAALAVAMAARRFMLRHLDACAMLRC 297
           G+R     N  P +   ++R   FL LVGL    +  + ++ A R ++       A L+ 
Sbjct: 238 GMRWRDSRNAAPGVERFVERIGSFLVLVGLAGLAVGGVGISAAVRAYLDGKTQVIATLKT 297

Query: 298 FGLTQAQVTRLYLGEFMLVGLAASVLGMLIGYAAHFALLQWLGNFMPTALPPA-GWQPAV 356
            G     +   YL +  ++      LG+++G A        L   +P  +P A G  P  
Sbjct: 298 LGAEGGTIFAAYLMQIGILTAIGVGLGLVLGAAIPIVAAPLLTANLP--MPAAFGLHPGP 355

Query: 357 QGVAA--GLLLLLGFALPPILQLRNVPHNRVIRRDQLT----PQPLTVATYGLGTLVFSG 410
              AA  G+L  L F L P+ +   V    + R         P    +   GL      G
Sbjct: 356 LAEAALYGVLTALVFTLWPLARTEQVRAAELFRDAAAPKFHLPSRRYMVALGLAVAALIG 415

Query: 411 LLLWQAGDLKLGLLTIAGFLGGFGLFALVAWLCLRALRSL---RGLVDRQSWRFAIDGLQ 467
             +  +G   L L ++ G  G   L    AWL  RA R L   R +  R + R A+  + 
Sbjct: 416 SAVAFSGIPTLALGSLGGIAGALLLLVGAAWLVRRAARRLARSRMVRGRTALRLALGAVG 475

Query: 468 RRPAAAVMQVVALGLGLMALLLLTVIRGDLVGAWRQATPADAPNRFIINIQPDQ-RQAVE 526
                    V++LGLGL  L  +  I  +L     +  P DAP+ F ++IQPDQ    + 
Sbjct: 476 GPGGETTSVVLSLGLGLAVLAAVGQIDSNLRNVIAEELPNDAPSYFFVDIQPDQIGDFLS 535

Query: 527 QLLRQGGVGDVALYPMIRGRLVQINGRAISAADYAEDRAKRLVDREFNLSTLREIPPGNG 586
           +      V  V   PM+RG + +ING    A + A D      DR    +T     P   
Sbjct: 536 RTRGDPAVRRVDSAPMLRGVITRINGEP--AREVAGDHWVLRGDRGVTYATAPG--PDTR 591

Query: 587 IVAGRWYD---DRQPEASVERGLAQTLGIKLGDRLQFDIAGQLVEAPVTSLRKLEWGSLR 643
           IV G ++    D  P+ S     A+ LG++LGDRL  +I G+ +E  +TS R +++ +  
Sbjct: 592 IVEGAFWPEDYDGPPQISFAEEEARELGLELGDRLTVNILGRDIEGEITSFRVVDFSTAG 651

Query: 644 VNFFVILNPTLMRDTPQSWITAVHLNPQQEA-LGNTLTRDYPNLTVVDIGSVLRQIQDVV 702
           + F + +NP  +R  P ++I+ V+     EA L   +  D PN+T + +   + ++ + +
Sbjct: 652 IGFVLTMNPAALRGAPHTFISTVYAEEAAEAQLLRDVAADAPNITAIRVRDAIDRVTEAL 711

Query: 703 GQVISAVEFLFLFTLCSGVLVLYAALAGSQDERVREAGLLRALGATRVELARAQRIEVLL 762
             + +A  +    TL +G +VL  A A  +  RV EA +L+ +GATR  +  +  +   +
Sbjct: 712 SGLAAATSYGAAATLVTGFVVLIGAAAAGERARVFEAAVLKTVGATRGRILASFALRSAM 771

Query: 763 VGALAGLLAASGAAAIGWALAHYVFNFDWSFSPLVWLAGMSLGAACSALGGWAGLRHVLR 822
           +G  AGL+A       GW +  +V    + F P+  LA ++ GA  + L G A     L 
Sbjct: 772 LGLAAGLVAIFAGGLAGWGVMTFVMEAGYRFEPVSALAIVTGGALATLLAGLAFAWRPLA 831

Query: 823 RPPLQTLR 830
             P +TLR
Sbjct: 832 TRPARTLR 839