Pairwise Alignments

Query, 567 a.a., bacteriocin ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 598 a.a., type I secretion system ATPase from Phaeobacter inhibens DSM 17395

 Score =  179 bits (454), Expect = 3e-49
 Identities = 155/547 (28%), Positives = 263/547 (48%), Gaps = 33/547 (6%)

Query: 40  VAGIVVNVLGLLMPLYSRLIYDKVIGNHIPETLWALTLGMLLFVALELVLRIIRVYYTEQ 99
           V     N+L L  PLY   +YD+V+G+   ETL ALT+   L   L L++ ++  Y   +
Sbjct: 32  VFSFFANLLMLTSPLYMMQVYDRVLGSRSLETLVALTV---LAGFLFLIMGVLD-YVRGR 87

Query: 100 LAGRLDSEF-DEVSARRMLTARVQAPVG----VVLARYRDLSAARDLMSSNYMLLLVDLP 154
           +  R+ + F D++  R     + ++  G          RDL A +  +SS  +    DLP
Sbjct: 88  ILARVGARFHDQLETRVFNAVQDKSAAGFNDDAAKVGLRDLEAMQKALSSPIVSAFFDLP 147

Query: 155 FLLLYLVVLGLIGGHMVWVLLVGGGLLVGL----QLLLKVPGND---YANSAMKAGTGKV 207
           +  L+L ++ L    M  + L+GG +LV      Q++ K P  +    A SA +   G  
Sbjct: 148 WTPLFLGLIALFHPLMGLLALIGGAVLVVFALANQMVSKAPVENASMMAASAHQVSDGMR 207

Query: 208 DKLASIVYGMETLKTSPLQHRLLRAFLADASANAVAQAKSRFWMNTSYAISSVGYTL-IS 266
           +  A ++ G+   + +  + R+LR+        AV    S   M   ++ ++  + L + 
Sbjct: 208 NN-AELIQGLGMRRAAFAKWRMLRS-------QAVVSELSAADMTGGFSTATRTFRLALQ 259

Query: 267 VATLVVGVYLVEDNLLTVGALIACSLLISRAATVLSSLAAFLGRIEMFRRARAEFDQLFE 326
            A L  G YLV    LT G +IA S+++ RA   + +L      ++   +A+    Q+  
Sbjct: 260 SAMLGTGAYLVLTEGLTPGVMIASSIIMGRALAPIETLIGQWALVQRAMQAQERLAQMLT 319

Query: 327 EPEQGPTADVLRQDMRGLIQVGNLLLHL---DKKETPTLRNISLTIQPGEKVGIVGRSGS 383
           E  + P    L +    L   G  L+      +   P L+ ++  IQPG+ +G++G SG+
Sbjct: 320 ETPERPAPMKLARPAAKLEVQGVALVPPVAPGQVAKPALQGLNFNIQPGQALGVIGASGA 379

Query: 384 GKSTLLRTLAGLHQAEEGHVLIDGVAVTAYAEEVRMRCIGFKPQEPFLFDGTVAANIFVG 443
           GKS+L R L G+     G + +DG A+  Y  +     IG+ PQ+  LFDGT+A NI   
Sbjct: 380 GKSSLARALIGVWHPVSGKIRLDGAALNQYDMDDLGSYIGYLPQQVTLFDGTIAENIARL 439

Query: 444 DRVPG-QVYEAALAVSSLDDLIARGELRLDQLIKAPGN-LSGGQRQMVALARVIACTPRI 501
             +P      AA   +++ D+I       D  ++   N LSGGQ Q + LAR +   P +
Sbjct: 440 SMMPDPDQVVAAARKAAVHDMILTLPQGYDTPVRVASNRLSGGQVQRIGLARALYGDPVL 499

Query: 502 LLLDEPTTGIDQQTEARIIERLVGYA--GGRTLVVATHSPALLRHMDRIVVIDGGRIVAD 559
           L+LDEP + +D +  ++ +   V +A   GR +++  H PA ++  D I+++D G   A 
Sbjct: 500 LVLDEPNSNLDNE-GSQALNLAVSHAKKDGRAVIIMAHRPAAIQLCDLILILDNGTQRAF 558

Query: 560 GPRAQIL 566
           G +  +L
Sbjct: 559 GAKDAVL 565