Pairwise Alignments

Query, 567 a.a., bacteriocin ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 576 a.a., alkaline protease secretion ATP-binding protein AprD from Phaeobacter inhibens DSM 17395

 Score =  189 bits (480), Expect = 3e-52
 Identities = 166/563 (29%), Positives = 268/563 (47%), Gaps = 30/563 (5%)

Query: 23  SYLSLLRAYGSR----FVEIIVAGIVVNVLGLLMPLYSRLIYDKVIGNHIPETLWALTLG 78
           S L  LRA+  R    +  + +    VN+L L  PLY   +YD+V+G+    TL AL+L 
Sbjct: 8   SGLEELRAHRRRSRGLYWSVGIFSFFVNMLMLTGPLYMMQVYDRVLGSRSVATLIALSLL 67

Query: 79  MLLFVALELVLRIIRVYYTEQLAGRLDSEFDEVSARRMLTARVQAPVGVVLARYRDLSAA 138
           ++       VL   R     ++  R  +  D+     M+     A   V      DL + 
Sbjct: 68  VVFLYGTMGVLDYARGRILARVGARFQAGLDQRVFDAMIRRSAVAQDPVAQTGLSDLESV 127

Query: 139 RDLMSSNYMLLLVDLPFLLLYLVVLGLIGGHMVWVLLVGGGLLVGLQLLLKVPGNDYANS 198
           + L++S  +    DLP+  ++L  + L    +  + L GG +L+ + +L     N + + 
Sbjct: 128 QRLIASPVLGAAFDLPWTPIFLFGIALFHPWLGMLALGGGAVLIAIAVL-----NQFLSR 182

Query: 199 AMKAGTGKVDKLASIVYGMETLKTSPLQHRLLR--AFLADASANAVAQAKSRFWMNTSYA 256
             +   G     A+++      +   +Q   +R  AF    +    A   S    +    
Sbjct: 183 RPQMQAGMSGHRANLMSEEIRTEAEMIQSMGMRRAAFQRWKAGRDAALVDSVTASDVGGG 242

Query: 257 ISSVGYTL---ISVATLVVGVYLVEDNLLTVGALIACSLLISRAATVLSSLAAFLGRIEM 313
            +++  TL   +  A L +G YLV  N +T GA+IA S+L+ RA   L+ +   LG+  M
Sbjct: 243 FTTLTKTLRLFLQSAMLGLGAYLVLQNEVTAGAMIAGSILMGRA---LAPIELALGQWAM 299

Query: 314 FRRARAEFDQLFE----EPEQGPTADVLRQDMRGLIQVGNLLLHLDKKETPTLRNISLTI 369
            +RA   +  L E     PE+    ++ +      ++V  L +       P LRN+S  +
Sbjct: 300 VQRALKGWRNLAELLDKVPEEAERTELPKPTAN--LEVQALAVVPPGDNRPQLRNVSFRV 357

Query: 370 QPGEKVGIVGRSGSGKSTLLRTLAGLHQAEEGHVLIDGVAVTAYAEEVRMRCIGFKPQEP 429
           QPG+ +G++G SGSGKSTL R L G  +   G V +DG ++  YA EV  + IG+ PQ  
Sbjct: 358 QPGQAIGVIGPSGSGKSTLARALTGAWRPAAGTVRLDGASLDQYAPEVLGQNIGYLPQRV 417

Query: 430 FLFDGTVAANIF-VGDRVPGQVYEAALAVSSLDDLIARGELRLDQLIKA-PGNLSGGQRQ 487
            LF+GT+A NI  +      +   AA   ++  D+I       D  I A  G LSGGQ Q
Sbjct: 418 QLFEGTIAQNIARLSPNPDSEKVVAAAKKAAAHDMIVHLPDGYDTHITAGGGRLSGGQMQ 477

Query: 488 MVALARVIACTPRILLLDEPTTGIDQQTEA---RIIERLVGYAGGRTLVVATHSPALLRH 544
            VALAR +   P I++LDEP + +D        R I++L   A G ++++  H PA ++ 
Sbjct: 478 RVALARALYDDPVIVILDEPNSNLDNDGSVALNRAIKQL--KADGHSVLIMAHRPAAIQE 535

Query: 545 MDRIVVIDGGRIVADGPRAQILQ 567
            D ++VID G   A GP+ ++L+
Sbjct: 536 CDLLLVIDQGVQTAFGPKDKVLR 558