Pairwise Alignments

Query, 567 a.a., bacteriocin ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 776 a.a., ABC transporter, ATP-binding protein/permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  286 bits (731), Expect = 3e-81
 Identities = 180/539 (33%), Positives = 287/539 (53%), Gaps = 11/539 (2%)

Query: 38  IIVAGIVVNVLGLLMPLYSRLIYDKVIGNHIPETLWALTLGMLLFVALELVLRIIRVYYT 97
           +++A +VVN+L +  PL+   +YD+V+ N   +TLW L +G+ +    + VLR +R Y+ 
Sbjct: 212 VLLASVVVNLLTVASPLFFMNVYDRVVPNSATDTLWVLAVGIGIAYICDFVLRNLRSYFV 271

Query: 98  EQLAGRLDSEFDEVSARRMLTARVQAP---VGVVLARYRDLSAARDLMSSNYMLLLVDLP 154
           +      D        + ++  R+       G +    R+  + R+   S  +L LVDLP
Sbjct: 272 DVAGRNADVVLASRLMQHLMAVRLDNKPDSTGSLANNLREFESLREFFGSTTLLALVDLP 331

Query: 155 FLLLYLVVLGLIGGHMVWVLLVGGGLLVGLQLLLKVPGNDYANSAMKAGTGKVDKLASIV 214
           FL+L+L ++ LIGG M+ +  +   +++G+ +L++ P    A +  K    K   L  I+
Sbjct: 332 FLVLFLFIVALIGGEMIALPAIAIPVVLGVGMLVQYPFQRVAEAGYKEAMQKNALLVEII 391

Query: 215 YGMETLKTSPLQHRLLRAFLADASANAVAQAKSRFWMNTSYAISSVGYTLISVATLVVGV 274
            G+ET+K S  + RL  A+      +A + A S+   N S  +S +   L+SV  ++ GV
Sbjct: 392 NGLETVKASMAEGRLQHAWEKVVGMSARSNAHSKGLANLSITVSLLVTQLVSVGIIIWGV 451

Query: 275 YLVEDNLLTVGALIACSLLISRAATVLSSLAAFLGRIEMFRRARAEFDQLF----EEPEQ 330
           Y + D  LT+G LIAC++L +RA   LS +AA L R++  R A    D L     E PE 
Sbjct: 452 YKISDGTLTMGGLIACNMLSARAMAPLSQIAAMLARLQQSRMALKSLDILMQLPVERPED 511

Query: 331 GPTADVLRQDMRGLIQVGNLLLHLDKKETPTLRNISLTIQPGEKVGIVGRSGSGKSTLLR 390
            P  D     +   +++ ++       E   L  +SL I+PGEKVG++G+ GSGKSTL R
Sbjct: 512 RPYVDF--GPLEHSLELESVSFAYPGAERLALDGVSLRIRPGEKVGVIGKMGSGKSTLGR 569

Query: 391 TLAGLHQAEEGHVLIDGVAVTAYAEEVRMRCIGFKPQEPFLFDGTVAANIFVG-DRVPGQ 449
            + GL+Q  +G V   GV +           IG+  Q+ +LF GT+  NI +G      +
Sbjct: 570 LMMGLYQPRDGAVKFGGVDIRQMDMADLRGRIGYLSQDNYLFYGTLRDNIAMGVPNADDR 629

Query: 450 VYEAALAVSSLDDLIARGELRLDQLIKAPG-NLSGGQRQMVALARVIACTPRILLLDEPT 508
           +   A  V+ + +            +   G  LSGGQRQ VALAR +   P +L+LDEPT
Sbjct: 630 MIMRAADVAGVTEFARNHPAGFGLQVGERGMALSGGQRQAVALARALLHDPDVLILDEPT 689

Query: 509 TGIDQQTEARIIERLVGYAGGRTLVVATHSPALLRHMDRIVVIDGGRIVADGPRAQILQ 567
           + +D  +E    +RL    G +TLV+ TH  +++  +DR+VV+DGGRIVADGPR  +++
Sbjct: 690 SNMDTGSEFAFKQRLRALLGDKTLVLITHRMSVIDLVDRLVVVDGGRIVADGPRDAVIK 748