Pairwise Alignments

Query, 356 a.a., NADH:ubiquinone oxidoreductase subunit H from Herbaspirillum seropedicae SmR1

Subject, 323 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 93.2 bits (230), Expect = 8e-24
 Identities = 84/292 (28%), Positives = 136/292 (46%), Gaps = 25/292 (8%)

Query: 63  RVGPAGLLQPIADAVKLIFKEISTPSKANKALFYLAPVMTIMPALAAWAVVPFSPEHVLA 122
           RVG A LLQP  D +KL+ K    P  AN  +F + P++ +     A A++P    +  +
Sbjct: 45  RVG-APLLQPFYDVLKLMTKRTLVPENANLVVFLMVPLLGLASMGVAAAMIPIPGLYDPS 103

Query: 123 NVNAGLLYLMAITSMEVYGIIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLVVVLMV 182
                LL L  + S+    +++AG AS S +  +G  R  A M++YE  +   +V V + 
Sbjct: 104 PAFGDLLVLFYLLSVPAVMLMLAGSASGSPFGGIGFSREMAIMLAYEGPILLVIVSVALK 163

Query: 183 SGS-------LNMTDIVMGQTQGHFASMGLNFLSWNWLPLLPIFVIYFVSGVAETNRHPF 235
           +G+       L++++IV  Q Q H A +   F  W W    P  + Y     A     PF
Sbjct: 164 TGAALGQPICLSLSEIVRYQ-QAHGAYL---FDPWMW----PAVLTYIAFIPANLGISPF 215

Query: 236 DVVEGESEIVAGHMIEYSGMSFAMFFLAEYAAMILISILTALLFFGGWSAPVSALDFIPG 295
           D+ E ESE++ G +IEYSG++  +  L      +++  L  +LFF       +  + + G
Sbjct: 216 DIPEAESEVLEGPLIEYSGVALGLLKLTSAVKSVVVIGLGIVLFF------PNGPEGLFG 269

Query: 296 WIWLGLKTFFFLSLYVWI-RASFPRYRYDQ--IMRLGWKVFIPLTLVWLVVV 344
            +   LK        V + RA+  R R DQ  I  L W   + +  + LV +
Sbjct: 270 LVVFALKCLVITVCGVSVLRAAVGRMRIDQAVIFYLKWPELLGIASLALVAM 321