Pairwise Alignments

Query, 356 a.a., NADH:ubiquinone oxidoreductase subunit H from Herbaspirillum seropedicae SmR1

Subject, 300 a.a., Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 27/307 (8%)

Query: 28  VKILVVMVPLLVCVAYMTYWE-RKLIGWMHVRLGPNRVGPAGLLQPIADAVKLIFKEIST 86
           V + +  V L+VC A +     R++   +H R GP       +LQ   D  KL+ KE   
Sbjct: 4   VGLAIFNVLLVVCAAPLLDGVLRQVKARIHSRQGPP------ILQTYFDLAKLLVKE--D 55

Query: 87  PSKANKALFYLAPVMTIMPALAAWAVVPFSPEHVLANVNAGLLYLMAITSMEVYGIIIAG 146
               N+ LF  APV+ +   + +   VP +    L      +++L  +T M    + + G
Sbjct: 56  QRGVNQLLFAWAPVVCMASVILSALFVPMAGLSPLGFSGDAIVFLYVLT-MAPLCMCLGG 114

Query: 147 WASNSKYAFLGAMRASAQMVSYEISMGFCLVVVLMVSGSLNMTDIVMGQTQGHFASMGLN 206
            AS S YA+ GA R    +++ E  +  CL+   + + SLN+ D V     G  A     
Sbjct: 115 MASGSPYAYAGANREIMTLMAVEPVVAICLITSGIRAHSLNLADCVNAYAAGAPA----- 169

Query: 207 FLSWNWLPLLPIFVIYFVSGVAETNRHPFDVVEGESEIVAGHMIEYSGMSFAMFFLAEYA 266
                 L ++   + +F+   AE ++ PFD  E E+EI+ G +IEYSG   A+F  + YA
Sbjct: 170 ------LSMIIATIAFFLILPAELSKVPFDQAEAETEIMEGPLIEYSGRKLALFKWSFYA 223

Query: 267 AMILISILTALLFFGGWSAPVSALDFIPGWIWLGLKTFFFLSLYVWIRAS-FPRYRYDQI 325
             I++     +  F  W  P   ++F+P  I   L     +++ + + A  FPR++  Q 
Sbjct: 224 KQIVL-----ITLFVEWFLPWPHMNFVPLDILATLIKVVIVAVIIEVIAQIFPRFKIHQS 278

Query: 326 MRLGWKV 332
           +R  + V
Sbjct: 279 IRYFYAV 285