Pairwise Alignments

Query, 356 a.a., NADH:ubiquinone oxidoreductase subunit H from Herbaspirillum seropedicae SmR1

Subject, 324 a.a., NADH dehydrogenase (quinone) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  241 bits (616), Expect = 1e-68
 Identities = 130/326 (39%), Positives = 194/326 (59%), Gaps = 21/326 (6%)

Query: 26  TLVKILVVMVPLLVCVAY----MTYWERKLIGWMHVRLGPNRVGPAGLLQPIADAVKLIF 81
           +++ +++ +V + V V      + Y ERK+ G++  R GP  VGP G+LQ +ADA+KLI 
Sbjct: 9   SVLHVVLALVGVAVFVGLNGLLLVYAERKVAGFIQRRPGPYEVGPQGILQAVADALKLIG 68

Query: 82  KEISTPSKANKALFYLAPVMTIMPALAAWAVVPFSPEHVLANVNAGLLYLMAITSMEVYG 141
           K++  P +A+  LF++APV+   P L  +  +PFSP     +VN GLL ++A     V  
Sbjct: 69  KQLVRPDRADPLLFWMAPVLAFFPVLLLFLPIPFSPLLTGWDVNLGLLLILAFAGFNVLA 128

Query: 142 IIIAGWASNSKYAFLGAMRASAQMVSYEISMGFCLVVVLMVSGSLNMTDIVMGQTQGHFA 201
           +++AGW SN+KY  LGA RA AQ V+YEI +   ++ +    G+L++T IV GQ      
Sbjct: 129 LLLAGWGSNNKYGLLGAARAVAQSVAYEIPLLLAVLAIAFQEGTLSLTAIVGGQ------ 182

Query: 202 SMGLNFLSWNW-LPLLPI-FVIYFVSGVAETNRHPFDVVEGESEIVAGHMIEYSGMSFAM 259
                 + W W + + P+ F+I+FVS + ETNR PFD+ E ESE+ AG   EYSGM F M
Sbjct: 183 ----GGMPWQWNIAVQPLAFLIFFVSALGETNRAPFDLPEAESELTAGFHTEYSGMGFGM 238

Query: 260 FFLAEYAAMILISILTALLFFGGWSAPVSALDFIPGWIWLGLKTFFFLSLYVWIRASFPR 319
           FFLAEYA MI+   +  +LF GGW  P     F+ G  W   K +  L   +W R ++PR
Sbjct: 239 FFLAEYANMIVACSVCTVLFLGGWKGP-----FLDGAWWFLAKVYGLLLSMMWFRWTYPR 293

Query: 320 YRYDQIMRLGWKVFIPLTLVWLVVVA 345
            R+DQ++ L W+  +PL ++ L+  A
Sbjct: 294 VRFDQLLNLNWRWLLPLGVLNLLATA 319