Pairwise Alignments

Query, 158 a.a., NADH dehydrogenase subunit B from Herbaspirillum seropedicae SmR1

Subject, 173 a.a., NADH dehydrogenase (ubiquinone), 20 kDa subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  110 bits (274), Expect = 2e-29
 Identities = 48/106 (45%), Positives = 71/106 (66%)

Query: 38  CAVEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVAGTLCNKMAPALRKVYDQMPEPRWVI 97
           C +E ++     YD +RFG     SPR +D+++++G +     P LR++Y+Q P P+ VI
Sbjct: 29  CDIEEVNAFTPYYDAERFGLKLVGSPRHADVLLISGPVTRTAEPRLRRLYEQTPNPKVVI 88

Query: 98  SMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLYGV 143
           + GSCA GGG +  SY V+ G D++VPVD Y+PGCPP  EA+L+GV
Sbjct: 89  ACGSCAVGGGMWFDSYHVLGGADKVVPVDFYIPGCPPRPEAILWGV 134