Pairwise Alignments

Query, 158 a.a., NADH dehydrogenase subunit B from Herbaspirillum seropedicae SmR1

Subject, 157 a.a., NADH ubiquinone oxidoreductase 20 kDa subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  108 bits (269), Expect = 5e-29
 Identities = 50/139 (35%), Positives = 86/139 (61%), Gaps = 3/139 (2%)

Query: 16  LDKVINWTRTGSLWPMTFGLACCA---VEMMHVGASRYDLDRFGAVFRPSPRQSDLMIVA 72
           L+  IN  R  S W + F    C    +E++      +D++RFG +   +P+ +D+++V 
Sbjct: 4   LENWINKGRLKSPWVVHFDCGSCNGCDIEVLACLTPVFDVERFGIINVGNPKHADVLLVT 63

Query: 73  GTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGC 132
           GT+ ++    L+ +YDQMP+P+ VI++G+C   GG +   Y+VV G D+++PVDVYVPGC
Sbjct: 64  GTVNHRNKKVLKNIYDQMPDPKAVIAIGACGTSGGVFRECYNVVGGVDQVIPVDVYVPGC 123

Query: 133 PPTAEALLYGVIQLQNKIK 151
           P   +A++ GV+   + +K
Sbjct: 124 PAKPDAIIDGVVTALDVVK 142