Pairwise Alignments

Query, 240 a.a., pseudouridine synthase from Herbaspirillum seropedicae SmR1

Subject, 254 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

 Score =  101 bits (251), Expect = 2e-26
 Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 5/216 (2%)

Query: 4   LTLDRILQSQGFGSRKYCRELIEDGEVVINGEVVDDYRATPDTKDLVLTIFEEEWEYREH 63
           + L ++L   G  SR+   ++I DG V ++G VV +     D +  V+ +        + 
Sbjct: 14  IRLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVVRVDGARVVLDDS 73

Query: 64  -VYIAINKPPNIECSRKPSH-HPGVLTLLPEQFTW-RDVQPVGRLDHDTTGLLLMSDDGA 120
            VY+A+NKP  +  +       P +  L+  +    + +  VGRLD DT GL+L+++DG 
Sbjct: 74  LVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDADTEGLMLLTNDGE 133

Query: 121 FIHAQSSPKRHVPKVYAATTAEPVTEALIAQLKAGVQLHDEPAPL--AATRCRQLGENLL 178
             H    P   VPK Y AT    V   L   L+AG++L D PA +   A      G+ L+
Sbjct: 134 LAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDFAVVDAIPGKTLV 193

Query: 179 EIVLEQGKYHQVKRMLAAAGNHCSALQRTAIGGLQL 214
            + L +G+   V+R+LAAAG    AL RT IG + L
Sbjct: 194 RVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSL 229