Pairwise Alignments

Query, 837 a.a., chemotaxis protein CheA from Herbaspirillum seropedicae SmR1

Subject, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  382 bits (980), Expect = e-110
 Identities = 190/389 (48%), Positives = 286/389 (73%), Gaps = 3/389 (0%)

Query: 449 KSVKVEQVKIDRLMNLIGEMVVSKNALPYLAQRAEDQFGVRELAREIKAQYAVINRIAEE 508
           K++KV+Q K+D LM+L+GE++V+KN++ YLA RAE++FGVR+LA++IKA+ +VI+R+AE+
Sbjct: 370 KTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKAEQSVISRLAED 429

Query: 509 MQDAIMQVRMMPVSVVFQRFPRLVRDISRKLGKEVQLVLVGEETEADKNIIEALADPLIH 568
           +Q  +MQVRM+P++ VFQR+PRL+RDISRKLGK+V L++ GE+TEADK+I+E L++PL+H
Sbjct: 430 LQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVEDLSEPLVH 489

Query: 569 IVRNSLDHGLEGPEQRRASGKPALGSLTISAAHEGDQVVIVIEDDGKGIDPALIKRKAYE 628
           ++RN+LDHG+E P+ RR  GK   G +T+SA    D V+I + DDGKG+D   +K KA E
Sbjct: 490 LIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVERVKTKALE 549

Query: 629 KGLIDEAQLERISDQDAVNLVFSSGFSTAEVVSDLSGRGVGMDVVRNAVEKVNGSLALHS 688
           +GL++ ++LER+S Q+ ++L+F  GFST E VSDLSGRGVGMD VR A+E+  G+L L S
Sbjct: 550 RGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERNGGTLTLSS 609

Query: 689 VSGKGTRLQISLPLSMAVTKVMIIESDGQLFGVPMEHVMETVRVPR-SSLHFANSSAKMV 747
             GKG+ + + LPLSM +++VM+ E + Q F +P+E V++T+++ R   +    +    +
Sbjct: 610 EPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRRVKNLDTFI 669

Query: 748 LRGHILGLKGINQILGIAAEQKTNADGEVAVLVVRVGGQSVGLVIDDFRETVDVIQKPLL 807
           LRG  + +  + +   + + Q    D +  +LVVRVG   +GL +D  +E  DVI KPL 
Sbjct: 670 LRGETVPILYLKRAFEMNSAQ-IYPDIQ-PILVVRVGDDVLGLAVDRLQEGQDVIIKPLE 727

Query: 808 GILGGLSLYSGSALMGDGSVLMVLNTREM 836
           G L   S+Y G+A+MGDG VL+VL+T E+
Sbjct: 728 GALATFSIYRGAAIMGDGRVLLVLDTEEV 756



 Score =  102 bits (253), Expect = 1e-25
 Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 22/279 (7%)

Query: 1   MTLLRDQFILETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFD-VPEMT 59
           M  +   FI+E+RDL++  +  L+ LE  P+   ++  LFR +HT+KG SG+ D +   T
Sbjct: 1   MNPIMQNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFT 60

Query: 60  RVLHACEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIA 119
           ++ H  EDLM  VR   VA +  + D +L         CD   +  E+ + H + + +  
Sbjct: 61  QLAHRMEDLMQKVRDGHVALNGTMLDLMLGC-------CDQFLLWIEELEQHQELSAEAV 113

Query: 120 SSLRQLIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPLRRQAFAQA 179
           S  +Q+I + A +  A                 VAA      L +  + E L R  F   
Sbjct: 114 SISKQMIAQLAPLTQAA--------PTHTPTPAVAAQEETATLSISELTELLGRDCFNDV 165

Query: 180 QA---GGELHWIAYRPSRECFFQGDDPFHRAREVPGFIWGRIEAPAAWPPLAELNAYDCV 236
           +A     +   + Y P ++CFF GDDP    R V    W ++      P     + Y   
Sbjct: 166 EALLEHPDALLLIYTPDKQCFFSGDDPLAWMRSVEKVSWRKV---VLIPDSEPFDTYQAQ 222

Query: 237 LHFQIVAAASQAELMEYFRYVPDQVELTQLAAQWLAPAP 275
           + F ++  +++ +L +    +  Q  L ++ +  L  AP
Sbjct: 223 MQFLLLTQSAKKDLEQQLAPIEGQYRLYRIQSDNLPTAP 261