Pairwise Alignments

Query, 837 a.a., chemotaxis protein CheA from Herbaspirillum seropedicae SmR1

Subject, 724 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  253 bits (645), Expect = 4e-71
 Identities = 146/384 (38%), Positives = 231/384 (60%), Gaps = 17/384 (4%)

Query: 450 SVKVEQVKIDRLMNLIGEMVVSKNALPYLAQRAEDQFGVRELAREIKAQYAVINRIAEEM 509
           S++V   K+D L++L+GE+V+ +  L   A    D  G+  L  E++       R+++E+
Sbjct: 330 SIRVAASKLDFLVDLVGELVIVQAQLSQAAHLRSDP-GLLGLVEELE-------RLSDEL 381

Query: 510 QDAIMQVRMMPVSVVFQRFPRLVRDISRKLGKEVQLVLVGEETEADKNIIEALADPLIHI 569
           +D  + +RM+P+   F +F RLVRD+S +LGK+V+LV +G ETE DK +IE L DPL+H 
Sbjct: 382 RDTTLGIRMLPIGTTFSKFRRLVRDLSAELGKDVELVTLGGETELDKTVIERLGDPLVHC 441

Query: 570 VRNSLDHGLEGPEQRRASGKPALGSLTISAAHEGDQVVIVIEDDGKGIDPALIKRKAYEK 629
           +RNS+DHG+E P+ R A+GKP  G++T+SAAH G +V+I I DDG GIDPA +   A  +
Sbjct: 442 LRNSMDHGVESPDVRAAAGKPRTGTVTLSAAHAGGEVLITIADDGAGIDPARVLEIARRR 501

Query: 630 GLIDEAQLERISDQDAVNLVFSSGFSTAEVVSDLSGRGVGMDVVRNAVEKVNGSLALHSV 689
           G+I  A    +  ++A+ L+F+ GFSTAE V+ +SGRGVGMDVV+ ++E + G + L S 
Sbjct: 502 GVI--APDVELPAREAIELIFAPGFSTAEKVTSVSGRGVGMDVVKRSIEALRGRIELDSA 559

Query: 690 SGKGTRLQISLPLSMAVTKVMIIESDGQLFGVPMEHVMETVRVPRSSLHFANSSAKMV-L 748
            G+GT L I LPL++A+   + +   G+ + +P+ HV E      S+   A+   +++ L
Sbjct: 560 VGRGTTLTIRLPLTLAIIDGLQVLVGGESYVIPLNHVEECAE--HSTPSSADGRQRIINL 617

Query: 749 RGHILGLKGINQILGIAAEQKTNADGEVAVLVVRVGGQSVGLVIDDFRETVDVIQKPLLG 808
           RG I+    + ++   +      A     V+VV   G   GLV+D        + K L  
Sbjct: 618 RGEIVPYIRLRELFASSGP----APAIEQVVVVDAQGSRFGLVVDCVVGEHQTVIKSLGR 673

Query: 809 ILGGLSLYSGSALMGDGSVLMVLN 832
           I   +   SG+ + GDGS+ ++L+
Sbjct: 674 IYKDVPGISGATIKGDGSMALILD 697



 Score = 67.0 bits (162), Expect = 4e-15
 Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 3/167 (1%)

Query: 5   RDQFILETRDLLQGISEKLMQLEDAPEHVELLESLFRMVHTLKGNSGLFDVPEMTRVLHA 64
           R  FI E +DLL  +   L++LE  P+  +L+  +FR +HT+KG+  +F   ++    H 
Sbjct: 9   RAAFIEEAQDLLAELETALLELEAQPDDRDLVARVFRAMHTIKGSGAMFGFDDIAHFTHD 68

Query: 65  CEDLMDAVRRRQVAYSEVLADRLLDAMDFVAMLCDGLEMEAEQADPHAQEAVQIASSLRQ 124
            E + D VR  +V  +  L D  L + D +A L   L        P    A  I +SLR 
Sbjct: 69  VETVFDRVRNGEVPVTRQLLDLTLASRDHIAQL---LNCAVTGDAPDLAHAAAITASLRA 125

Query: 125 LIGEHAGVESAVGDLARIGDAQDRGAAIVAAPAAGQALPLRAIPEPL 171
           L+   A    A  D A  G+      A     A    +  R +P  L
Sbjct: 126 LVPVAAPPADAPADGAADGECPAETEAPCPPCARTWRVRFRPVPSIL 172