Pairwise Alignments

Query, 328 a.a., C-5 sterol desaturase from Herbaspirillum seropedicae SmR1

Subject, 386 a.a., sterol desaturase (RefSeq) from Shewanella amazonensis SB2B

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 28/245 (11%)

Query: 40  GTEFVLVGLCELVILFLILRPLESAIPVHPITDPRARWN-DFIYTVLQRLGVIPIVAFLL 98
           G +++++     V +F+ L  L        I  P   W  D  Y V   L +  I+ +  
Sbjct: 125 GVDWLILAFLGSVFIFMTLEKLLPRYKDQVILRPG--WGLDLWYFVFNHLAISAILLYA- 181

Query: 99  LDPALSYLSEALHLEGWGSFNLDQIWPGVTDQALVSFLLYMVVLDLCEYVYHWAQ---HN 155
                +Y     H   W   +  Q W     QAL  ++  + ++   ++V +W     H 
Sbjct: 182 -----NYHVSHFH---WAVSDEVQAWV----QALPLWVQVVAIILAADFVLYWEHRLFHE 229

Query: 156 VRWMWALHSLHHSQQNMNLWSDDRNHMLDNLFHDIIFGLIAVFIGVEPSQYILLVSLSRM 215
           V ++W +H++HHS ++++  +  R H +       +  +    +G + +   + V+ + +
Sbjct: 230 VGFLWPIHAVHHSVEDLDWLAGSRGHFIQMFSERAMVMVPLYLLGPDKAALDIYVAFAAL 289

Query: 216 LQSLQHANVRIHFGRIGEYLLVSPRFHRTHHAVGLGHESRGRNSLGGHNFAVLFPIWDVL 275
              L H N R+HFG I +YLLV+P FH  HH+     +     + G H      PI+D L
Sbjct: 290 QAVLIHCNTRLHFGPI-KYLLVTPWFHHWHHS---SEKPAIDTNYGAHT-----PIYDWL 340

Query: 276 FRTAH 280
           F T H
Sbjct: 341 FGTLH 345