Pairwise Alignments

Query, 396 a.a., ABC transporter substrate-binding protein from Herbaspirillum seropedicae SmR1

Subject, 384 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 88/326 (26%), Positives = 135/326 (41%), Gaps = 33/326 (10%)

Query: 36  GQAYRNGLALALEQINAAGGVGGRPLQLVVREDDGDADQAARNARALISQDHVEVLTGSM 95
           G A RNG  LA ++INA GGV G  +QLVV ++ G  ++     + LI QD V ++ G  
Sbjct: 41  GVAIRNGFQLAADEINAKGGVNGNKIQLVVEDEQGKKEEGINVFKKLIFQDKVLMVFGPT 100

Query: 96  LSDVALAVSREAARGRTVLVVGDALSDAITLDKGNRYTFR-------VRPSTYMQAA--M 146
           LS+   A    A   +TV+      ++ IT D G  Y FR       V P T   A    
Sbjct: 101 LSNSMFAAGPVANGAKTVVFGTSVTANGIT-DIG-PYVFRNSVMESDVLPVTVATATKHY 158

Query: 147 LAEQAARLPGRRWAVVAPNYEYGQSAVASFKLLLKQARPDVEFVSDQWPALGKIKADDVA 206
             +Q A + G   A     Y+  +  +   KL +      V+   D    L KIKA    
Sbjct: 159 KLKQVAVIYGNDDAFTKSGYDVFKKVLEDQKLPVTTTETYVKGDVDFKAQLTKIKA---- 214

Query: 207 RAIRQSRPDGIFNATFGEDLQKFVQAGNRQQLFEGVRVVSMASAG--APSLDPSQSEAIR 264
                S PD +  +   E+    +     Q    G++V  +   G  +P L    S+   
Sbjct: 215 -----SNPDAVICSCLAEEAANIM----LQARGLGIKVPFIGGNGFNSPKLF-EISKLAG 264

Query: 265 DWLAIGYPWDQVS-LPEHQRFLEAYLKRFSERPQLSAVFGYTTMMAIAAGLKKSE----- 318
           +   +G PW   +  P ++ F+ AY+K+++  P   A   +  +   AA L++ +     
Sbjct: 265 EGTFVGSPWSNTNPAPANKAFVAAYVKKYNAEPNQFAAQAFDALHVAAAALQEVKLSGDI 324

Query: 319 GGDGEVLVEAMRGLQFGSPLGPVSFR 344
             D E L  A+         GP  FR
Sbjct: 325 AADREALKNALPKATINGATGPFKFR 350