Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (448), Expect = 4e-49
 Identities = 102/265 (38%), Positives = 151/265 (56%), Gaps = 3/265 (1%)

Query: 7   PLNAIRAFLAAARHQSFTLAAHELNVTHGAISRQIKNLEGYLGMPLFERRTRQVLLTERG 66
           PLN+++ F AAARH SFT AA EL VT  A+S QIK LE +LG+ LF RR R +LLTE G
Sbjct: 7   PLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLLTEEG 66

Query: 67  RQFFEEASPALEILANAARRVMRDAPTRTVVINVRPSFAVRWLIPHLSDFVERYPGIAPQ 126
           + +F +       LA A  +++  +    + I++ PSFA++WL+P L+DF ++ P I  +
Sbjct: 67  QSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPDIDVR 126

Query: 127 VVTSTATVGKAGSSFDIAVRRGETNWPETLKVQRFMEDELVLVASPALLQA-MPLEDVSG 185
           +       G      D+A+  G  +WP  L+  +  ++ L+ + SPALL    P+E +S 
Sbjct: 127 IKAVDMDEGSLTDDVDVAIYYGRGSWP-GLRADKLYQEFLIPLCSPALLLGNKPMEKLSD 185

Query: 186 LARHTVLLSRSRRNDWEDWRKLAGLKRSRSQAMLHFDHVHFVLQAVVDGLGVALSPVSLA 245
           LA HT+L   SR+ DW+ + K  GL          F H   VLQA   G GVAL    LA
Sbjct: 186 LAYHTLLHDTSRK-DWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVALGNNVLA 244

Query: 246 DNDLRSGRLVCPFPDLRLTLAPYYL 270
             ++ +GRL+ PF ++ +T   +Y+
Sbjct: 245 QPEIDAGRLIAPFDEVLMTNNAFYV 269