Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 317 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  162 bits (409), Expect = 1e-44
 Identities = 111/301 (36%), Positives = 152/301 (50%), Gaps = 9/301 (2%)

Query: 7   PLNAIRAFLAAARHQSFTLAAHELNVTHGAISRQIKNLEGYLGMPLFERRTRQVLLTERG 66
           PLNA+RAF AAARH  FT AA EL+VT  A+S Q+K LE  LG+ LF R  + + LT  G
Sbjct: 7   PLNALRAFEAAARHGGFTGAARELHVTPAAVSHQVKGLEDALGVSLFHRLAKGLELTAAG 66

Query: 67  RQFFEEASPALEILANAARRVMRDAPTRTVVINVRPSFAVRWLIPHLSDFVERYPGIAPQ 126
           R +  E +   + LA A+ R+ R A    + ++V PSFA  WL P L+ F+ RYP I   
Sbjct: 67  RAYLPELTAGFDQLARASERLKRGALVGRLTVSVLPSFAAGWLAPRLASFLRRYPDILLD 126

Query: 127 VVTSTATVGKAGSSFDIAVRRGETNWPETLKVQRFMEDELVLVASPALLQA-MPLEDVSG 185
           + ++  TV       D+ +R G   +P  L   R +E+E+  + +PALL   +PL   + 
Sbjct: 127 LRSTPRTVDFIRERVDLGIRYGGGIYP-GLASYRILEEEVFPICAPALLNGPVPLRGFAD 185

Query: 186 LARHTVL-----LSRSRRNDWEDWRKLAGLKRSRSQAMLHFDHVHFVLQAVVDGLGVALS 240
           L  H +L     L       WE W   AG+     +A   F     ++ A V GLGV + 
Sbjct: 186 LRHHVLLHDPGILPGEPWTGWEPWLAEAGVTDIDLEAGHGFTESIAMIHACVAGLGVGIG 245

Query: 241 PVSLADNDLRSGRLVCPFPDLRLTLAPYYLGI--NAQAGSEAQLFARWLAEYRGASLMFA 298
              L    LRSGRLV PFP  R     Y++ +   +Q   +A  F  WL E  G     A
Sbjct: 246 RSGLVTELLRSGRLVRPFPVSRPADFSYWVVVPPPSQTNPKAAAFIGWLLETAGRGGAGA 305

Query: 299 G 299
           G
Sbjct: 306 G 306