Pairwise Alignments

Query, 300 a.a., LysR family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 320 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  155 bits (391), Expect = 2e-42
 Identities = 99/287 (34%), Positives = 155/287 (54%), Gaps = 9/287 (3%)

Query: 7   PLNAIRAFLAAARHQSFTLAAHELNVTHGAISRQIKNLEGYLGMPLFERRTRQVLLTERG 66
           PLNA+RAF +AAR QS TLA+ EL+VTHGAIS+QI+ LE +LG  LF R  ++V LT   
Sbjct: 25  PLNALRAFESAARLQSMTLASKELHVTHGAISKQIRVLEEFLGFALFVRLHKKVALTNEA 84

Query: 67  RQFFEEASPALEILANAARRV-MRDAPTRTVVINVRPSFAVRWLIPHLSDFVERYPGIAP 125
           +++      AL+ L++A   +  + +  +T+ INV PS  + WLIP +  F  R+P +  
Sbjct: 85  KRYLPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRHPHLYV 144

Query: 126 QVVTSTATVGKAGSSFDIAVRRGETNWPETLKVQRFMEDELVLVASPALLQAMPLEDVSG 185
            +      V  +   +DIA+ R  T  P  +   + M+++L LV +P+L  A  L+ +  
Sbjct: 145 DLSIGDFAVDFSQGRYDIAI-RSSTQLPRGVNYIKLMDEDLCLVCAPSL--APKLKSIED 201

Query: 186 LARHTVLLSRSRRNDWEDWRKLAGLKRSRSQAMLHFDHVHFVLQAVVDGLGVALSPVSLA 245
           + + T+L   +R   WE W    GL  +++Q     +H + + QA   G+G AL P    
Sbjct: 202 INQVTLLKHTTRPELWEYWADKVGLVLTQAQT-FGVEHFYMLSQAAASGMGAALIPRFFI 260

Query: 246 DNDLRSGRLVCPFPDLRLTLAPYYLGINAQAGS---EAQLFARWLAE 289
           +  L +G LV PF     +   YYL +  ++ S   + Q F  W+ E
Sbjct: 261 EEQLANGSLVIPFEAPFTSPYAYYL-LTPKSPSLPLKVQAFIDWMLE 306