Pairwise Alignments

Query, 324 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  267 bits (683), Expect = 2e-76
 Identities = 126/323 (39%), Positives = 211/323 (65%)

Query: 1   MSGAIARSVVQALMVVLLMTVIVFFGLHMIGNPVDILIGQDVDQVDRLRIIQELGLDQPV 60
           M   + + + QAL+V+ +++++ F     +G+P+  L+GQ V + +R  +  ELGL+ P 
Sbjct: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60

Query: 61  WRQYLAFLNGALHGNLGNSFVYNTPAILLIFQRLPATLELACAALLLALVVGVPLGLFAG 120
             +Y  F+  A+ G+LG S+ +  PA+ +IF +L ATLEL   A L+ +V  +PLG+++ 
Sbjct: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120

Query: 121 MKPDHPFSRLVMTTSIFGFSLPTFWIGLMLIMAFSVTLGWLPSGGRGQTAELFGVQWSWL 180
           + P   F+++VM  S  G S+P F   +ML+  FS+ LGWLPS GRG+T  L G +  + 
Sbjct: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180

Query: 181 TADGWRHMILPAINLSLFKISLVIRLTRANVREVLPMDFVKFARAKGLSPARVVLMYVLR 240
           T DG RH++LP+I L+   + L IRL R+ + EVL  +++KFA+AKGL   ++   + L+
Sbjct: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240

Query: 241 NTLIPLVTVVGLEFGSTIAFAVVTESIFAWPGAGKLILDSINALDRPVIVAYLMVIVCMF 300
           NT++P++TV G++ G+ +A+ ++TE++F WPG G L L++IN +D P+I AY++ +  +F
Sbjct: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300

Query: 301 VTINLVVDVLYKLLDPRVRVEAK 323
           V  N +VD+LY L++P V +  K
Sbjct: 301 VVTNTIVDLLYGLINPTVNLTGK 323