Pairwise Alignments

Query, 324 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Pantoea sp. MT58

 Score =  224 bits (570), Expect = 3e-63
 Identities = 120/318 (37%), Positives = 196/318 (61%), Gaps = 17/318 (5%)

Query: 19  MTVIVFFGLHMI-GNPVDILIGQDVDQVDR-LRIIQELGLDQPVWRQYLAFLNGALHGNL 76
           +T++ F  +HMI G+PV I+ G+     +R  +++  LGLDQP+W+QYL ++NG LHG+L
Sbjct: 19  ITLLTFAFVHMIPGDPVLIMAGERGISPERHAQLMALLGLDQPLWKQYLHYINGVLHGDL 78

Query: 77  GNSFVYNTPAILLIFQRLPATLELACAALLLALVVGVPLGLFAGMKPDHPFSRLVMTTSI 136
           G S     P       R  ATLEL   A++ A+ +G+P+G+ A +K    F    +  S+
Sbjct: 79  GISLKSRIPVWDEFVPRFKATLELGICAMIFAVAIGIPVGVLAAVKRGSIFDHTAVGISL 138

Query: 137 FGFSLPTFWIGLMLIMAFSVTLGWLPSGGR-GQTAELFGVQ----------WSWLTA--- 182
            G+S+P FW G+MLIM  SV     P  GR G T  L              + W      
Sbjct: 139 TGYSMPIFWWGIMLIMLVSVQFNLTPVSGRVGDTVFLDDSMPLTGFMLIDTFFWGEPGDF 198

Query: 183 -DGWRHMILPAINLSLFKISLVIRLTRANVREVLPMDFVKFARAKGLSPARVVLMYVLRN 241
            D   HMILPAI L    +++++R+TR+ + EVL  D+++ ARAKGL+  RV++++ LRN
Sbjct: 199 HDAVMHMILPAIVLGTIPLAVIVRMTRSAMLEVLGEDYIRTARAKGLTRMRVIVVHALRN 258

Query: 242 TLIPLVTVVGLEFGSTIAFAVVTESIFAWPGAGKLILDSINALDRPVIVAYLMVIVCMFV 301
            ++P+VTV+GL+ G+ +A A++TE+IF+WPG G+ +++++   D PV+   +++   + +
Sbjct: 259 AMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIEALQRRDYPVVQGGVLLTAVLII 318

Query: 302 TINLVVDVLYKLLDPRVR 319
            +NL+VD+LY +++PR+R
Sbjct: 319 VVNLLVDLLYGVVNPRIR 336