Pairwise Alignments

Query, 278 a.a., ABC transporter permease from Herbaspirillum seropedicae SmR1

Subject, 270 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (593), Expect = 4e-66
 Identities = 121/253 (47%), Positives = 168/253 (66%)

Query: 20  SAGQWSGLVLLLLVAGFALLGPLVIDTDPARQQLARYLETPSLAEPLGFDQLGRSMLARL 79
           S  QW G+ LL+L+    L+  L+   DPA+Q L R L  PS  EPLG D  GRS  ARL
Sbjct: 13  SKPQWLGVSLLILLVMLVLIEHLLYGGDPAKQDLNRALAAPSWGEPLGTDHYGRSNFARL 72

Query: 80  AHGARLSLSLALLSVLSAAIPGSLIGLLAAWCGGWTERVLAALADAVLALPGLLLVLLLA 139
           +     SL++A+  V S+A+ G + G++AAW  GW +R  + L + +LA+PGL+LVLL  
Sbjct: 73  SSAIATSLTMAVACVSSSALLGLVTGVVAAWKRGWWDRGFSWLLNMLLAMPGLILVLLFG 132

Query: 140 AFAPGGFWPLYVGISLALWVEYFRVVRAASRILLASPQVEASRLLGFGALYIVRCHLLPA 199
           A  PG F+ LY+ I+L LWVE+FRVVR+ +  LL  PQ+EASRL GF A Y+ R HL P 
Sbjct: 133 AMVPGSFFILYLAIALMLWVEFFRVVRSKTLSLLEQPQIEASRLYGFNAWYLFRRHLWPE 192

Query: 200 LLPRLLTLVRFGLAGAVLAMSALGFVGVGLQPPTPELGVMMIELLPYYREAPWLVASPVL 259
           L   L TL  FG   A+LA++++GF+ VGL+PP  ELG+MM+EL  YY +A W++A P+L
Sbjct: 193 LREDLFTLACFGAGNAILALASIGFLYVGLKPPQAELGMMMVELFRYYHQALWVLAQPIL 252

Query: 260 VLFLGLLGLLLLS 272
           V+F+ +L   +L+
Sbjct: 253 VVFILVLSFQMLA 265