Pairwise Alignments

Query, 507 a.a., RND transporter from Herbaspirillum seropedicae SmR1

Subject, 500 a.a., efflux transporter, outer membrane factor lipoprotein, NodT family from Dechlorosoma suillum PS

 Score =  269 bits (687), Expect = 2e-76
 Identities = 175/497 (35%), Positives = 260/497 (52%), Gaps = 12/497 (2%)

Query: 7   FKLKPLLAMLVASLALAACSVGPDYVRPQMDTGPAIFKEGQNWKPAQPRDLVADGKWWEM 66
           F L   L   +  LALA C+VGPDY RP+     A     +    AQ      + +WW++
Sbjct: 10  FALSQGLVATLTLLALAGCAVGPDYKRPEATLPEAYVATAEAAPAAQAP---VEKEWWKL 66

Query: 67  FGDPQLNALVAQVDISNQNLALAEANFRSAVALVQSSRSAYSPTLSASAGASRGSSGSAG 126
           F D  LN LV Q    N +L LA A    A  + + + +A+ P + A+A   R       
Sbjct: 67  FQDATLNDLVRQAQEHNHDLLLAVAQVEEAEGVAREAGAAFFPQIDANASGGRNEI---- 122

Query: 127 ASSSNAASGSSAGSVRNSYTFSLTAAWEADIWGKVRRDVESSQASAQASAADLAAARLSA 186
           +  ++    ++   +R+S   SL+ ++E D+WGK+RR  E+++A   +S        LS 
Sbjct: 123 SMKTDPLPAANTQRLRDSRKASLSTSFEIDVWGKLRRANEAARAQLLSSRYARDTVELSV 182

Query: 187 QAQVAQNYLQLRVLDAQQQLLEETVQAYERSLQVAQNQYAAGMVAKSDVIQAQTQLKSAQ 246
            + V   YL LR  DA   L  +TV   E++L + +++  AG  +  D+ QA++ L +AQ
Sbjct: 183 ASLVTNAYLTLRAADADLALTRDTVATREKALDIVKSKQEAGSASPLDLHQAESTLATAQ 242

Query: 247 ASALDNGVTRAQVEHAIALLVGKTPAQFALPRAPLAAVAPPVPQGVPSMLLERRPDVAAA 306
           A A      RA  E  +ALL GK   + A        + P  P G+PS LLE RPD+  A
Sbjct: 243 AQAASLRRQRAVAETQLALLTGKPDLKIAAGDLRQLPLPPVPPAGLPSSLLEARPDIRQA 302

Query: 307 ERRVASANAKIGVAKAAYFPSLTLSASGGYQSSTFADWFTLPGRVWSLGPQLAQTIFDGG 366
           E  + +ANAKIGVAKAA +PSL+L+ S G +S+   + FT     WSLG      IFD G
Sbjct: 303 EETLVAANAKIGVAKAALYPSLSLTGSLGSESAALTNLFTSAAGAWSLGLAATMPIFDFG 362

Query: 367 ARAAATDQAIATYDGTVATYKQTVLTAFQEVEDNLAALRILEQEAAVQGEALQAARQAVT 426
             AA  DQA A     + +Y++TV TAF+EV D L  LR   +    Q + +QA ++ + 
Sbjct: 363 RNAARIDQATAKQKQALISYQKTVQTAFKEVNDALVGLRENGEGERAQEKRVQATQKTLE 422

Query: 427 LVNNQYKAGTVSYVNVITAQATALSAELSSLNILNRRMAASVLLAKALGGGWDE----RS 482
           L   +Y+AG  +++ V+ AQ +A  A L  ++    R+ ++V L KALGGGW +     S
Sbjct: 423 LAQLRYEAGYSAFLEVLDAQRSANDALLDYVSTRQARLTSAVDLFKALGGGWKDDFKAES 482

Query: 483 LDDLGSLQQQSAEKAKA 499
           L + G+  Q +A  AKA
Sbjct: 483 LKNSGN-DQAAAPVAKA 498