Pairwise Alignments

Query, 267 a.a., LacI family transcriptional regulator from Herbaspirillum seropedicae SmR1

Subject, 269 a.a., cysteine transport system periplasmic binding protein from Klebsiella michiganensis M5al

 Score =  118 bits (295), Expect = 2e-31
 Identities = 81/244 (33%), Positives = 125/244 (51%), Gaps = 7/244 (2%)

Query: 26  ASASAQSIADLTKKGKITIGVVSGTPPFGSVDAKGTPI-GYDVDVANLIGKYLGLPVEIV 84
           A A A  +AD+   G + +      PPFGSVD K   I GYDVD A  + K LG+ +E+V
Sbjct: 19  AQAQADQLADIKAAGVVKVATFDANPPFGSVDPKTHKIVGYDVDFAEALAKSLGVKLELV 78

Query: 85  PLVPPARIPALESGKVDMLAATLAPTPERAKSVLFTIPYSGFELSIVAPVGSNYKKLDDL 144
              P  RIP L+SGK D++ A +  TPERA+ + F+ PY       + P  S   KLDD 
Sbjct: 79  ATNPANRIPLLQSGKADLIVADITITPERAQVIDFSTPYFVTGQQFLVPAKSP-DKLDDY 137

Query: 145 VKKKVGVSRGSTNDTALTRLAPPGTVLVRFEDDSTVTQALLSNQVDAISIPNT-MANEIV 203
            K ++G  +G+T + AL +  P   VL  ++D      AL +  V AI+  +T +A  + 
Sbjct: 138 SKARIGAVKGTTGEQALHQRFPQSRVL-SYDDIPLALTALRNGNVQAITQDSTILAGLLA 196

Query: 204 KSRGQGKIEVKFP--YSVQPNSMTVRKGSYELQQWLNNFIYYVKLNGELDAISRKWAGPL 261
           ++  +   ++  P   S +   + V+KG   L + +N+ +  ++ +GE   I   W GP 
Sbjct: 197 EAPDKANFKI-IPDLLSKEEIGVGVKKGEPTLLKAVNDELVKLEKSGEAAKIYDVWFGPS 255

Query: 262 PNLP 265
              P
Sbjct: 256 TKTP 259



 Score = 22.7 bits (47), Expect = 0.009
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 15  TLAAACAVATTASASAQSIADLTKKGKITIGVVSGTP 51
           T+ A         A+ + I DL  K +I +GV  G P
Sbjct: 189 TILAGLLAEAPDKANFKIIPDLLSKEEIGVGVKKGEP 225