Pairwise Alignments

Query, 964 a.a., isoleucyl-tRNA synthetase from Herbaspirillum seropedicae SmR1

Subject, 940 a.a., Isoleucyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

 Score =  694 bits (1792), Expect = 0.0
 Identities = 394/959 (41%), Positives = 558/959 (58%), Gaps = 58/959 (6%)

Query: 19  APSKYPVNMTETAFPMRGDLAKREPQWVKQWQEKKVYERIRKASAGRPKFILHDGPPYAN 78
           A  K  V +  T FPM+  LA++EP  + +W++  +Y R+R+ S GR +F+LHDGPPYAN
Sbjct: 3   ADYKSTVFLPTTDFPMKAGLAEKEPGILARWEKLDIYARLRERSKGREQFVLHDGPPYAN 62

Query: 79  GEIHLGHAVNKILKDMIVKARNMAGFDAQYVPGWDCHGMPIEIQIEKKYGKN------LP 132
           G +H GHA+NKILKD+I +++ M G DA YVPGWDCHG+PIE +IE++Y         + 
Sbjct: 63  GHLHNGHALNKILKDVITRSQQMLGKDANYVPGWDCHGLPIEWKIEERYRAQGRRKDEID 122

Query: 133 VAEVQAKARAYANEQIALQKKDFIRLGVLGEWDNPYKTMNFSNEADELRALGKILEKGYV 192
           V E + + R +A E IA+Q+++F RLG+ G+W  PY TM F+ EA  +R LGK L  G +
Sbjct: 123 VIEFRRECRQFAEEWIAIQREEFKRLGITGDWKRPYTTMAFAAEAQIVRELGKFLMAGDL 182

Query: 193 YRGLKPVNWCFDCGSALAEAEVEYQDKRDPAIDVGFPFAEHDKVATAFGLTDLPTRHGYI 252
           Y+G KPV W     +ALA+AEVEYQD     I + FP       A              +
Sbjct: 183 YKGAKPVLWSVVEKTALADAEVEYQDHTSTTIWIRFPVIRTPVTAL---------EGASV 233

Query: 253 VIWTTTPWTIPANQALNVHPEFEYALVETSRNGEATL------LILAKDLVASCLERFGL 306
           VIWTTTPWT+P N+A+   P  +Y +   +   E +L      + +  DL+   L++  +
Sbjct: 234 VIWTTTPWTMPGNRAVAYGPGMDYVVFRVTATAEGSLARAGERIAVCADLLDDVLKQAKI 293

Query: 307 -EGKIIATTTGEKLSLIRFHHPLAKADAGYDRLSPVFLGEYVTADSGTGIVHSSPAYGIE 365
            E + IA   G  L+     HP A    GYD   P+  G +VT + GTG VH +P +G +
Sbjct: 294 TEIEEIAHVKGADLAGTVCRHPWA--GKGYDFEVPLLSGLFVTTEQGTGFVHMAPGHGED 351

Query: 366 DFVSCKAHGMKDDDILNPVMGDGRYASWLPLFAGLTIWEASKPICDKLEEIGSLFKLIMF 425
           D+  C A+G+   D ++   GDG Y   +P FAG  +++ +  I   + + G+L      
Sbjct: 352 DYFLCLANGIAPPDTVD---GDGLYMDHVPGFAGKHVFKVAPDIVAAMIDAGALLAQGSL 408

Query: 426 SHSYMHCWRHKSPIIYRATSQWFASMDNTPKDGGPSLRQTALQGIEDTAFFPGWGKARLH 485
           +HSY H WR K+P+I+R T QWF SM+   K+G   LR  AL  I++T + P  G+ R+ 
Sbjct: 409 THSYPHSWRSKAPLIFRNTPQWFISME---KNG---LRDKALAAIDETRWVPPQGRNRIR 462

Query: 486 GMIANRPDWTLSRQRQWGVPMAFFVHKETGELHPRTPELLEQIAQRIEQGGIEAWQALDP 545
            MI +RPDW +SRQR WGVP+A FV K  G L  R   + E+IAQ     G +AW   DP
Sbjct: 463 AMIESRPDWCVSRQRSWGVPIAIFVDKRDG-LPLRDAAVTERIAQAFGAEGADAWFTGDP 521

Query: 546 KELLGDEAD--QYLKNKDTLDVWFDSGSTHQTVLRGSHRQELQFPADLYLEGSDQHRGWF 603
           +  LG E D   +   +D ++VWFDSGSTH  VL    R +L++PADLYLEGSDQHRGWF
Sbjct: 522 RRFLGAEHDPENFEPVRDIVEVWFDSGSTHAFVLEA--RDDLKWPADLYLEGSDQHRGWF 579

Query: 604 HSSLLTSSMLNGRAPYKALLTHGFVVDGEGRKMSKSLKNGVEPQKVADSLGAEILRLWVA 663
           H+SLL S    GRAPY A+LTHGF++D +G K+SKS  N   PQKV  S+GA+I+RLWV 
Sbjct: 580 HTSLLESCGTRGRAPYDAVLTHGFLLDEKGDKLSKSKGNAESPQKVVSSVGADIMRLWVV 639

Query: 664 SSDYSGEISISEEILKRVTEAYRRIRNTLRFLLANTSDFDPAQHAVPMAELLEIDRYAIA 723
           SSDY+G+I    EILK+ T+ YRR+RNTLRFLL   + FD A+    +A + E++R+ + 
Sbjct: 640 SSDYTGDIRFGPEILKQTTDTYRRLRNTLRFLLGALAGFDKAERIDDIAAMPELERWVLH 699

Query: 724 NMARLQGEVLAHFETYEFHPVVAKLQMYCSEDLGGFYLDILKDRLYTSGVDSAARRSAQT 783
            ++ +  +V    + + FH +  +L  +C+ DL  FYLDI KD LY  G  S  RR+ +T
Sbjct: 700 RLSEIDVKVRGCCDAFSFHEMFQELHGFCAVDLSAFYLDIRKDALYCDGAGSLRRRACRT 759

Query: 784 AVWHITQSLLRLMAPILSFTAEEAWSFFAGKEAFEASGETIFSQVYYALPEVADAQGLLA 843
            +  +   L++ +AP + FTAEEAW        F +  +++  Q +  +P       L  
Sbjct: 760 VIDTVFDCLVKWLAPFVCFTAEEAW-----LTRFPSEDDSVHFQSFPTVPGDWRDDALAE 814

Query: 844 KFAVLHEVRAAVTKQLEEVRIAGSIGSSLQAEVELKVAGEKAALLESLGDDLKFVLITSA 903
           ++  +  +R  +T  LE  R   +IG+SLQA   +    E   L    G D+  + ITS 
Sbjct: 815 RWTKVRRLRRVITGALEVARANKTIGASLQAAPVVHAPAE--LLNACAGLDMAEISITSD 872

Query: 904 ARVTRVA---------SVEEEA---VVVTPSAHQKCERCWHYRADVGSHAEHAGLCGRC 950
             +T  A         +++E A   VVV  +  +KC+RCW    DVG+HA H GLCGRC
Sbjct: 873 ITLTDSADQPIPEGAYTLDEVAGVGVVVALAEGEKCQRCWEILPDVGTHA-HEGLCGRC 930