Pairwise Alignments

Query, 158 a.a., transcription elongation factor GreA from Herbaspirillum seropedicae SmR1

Subject, 167 a.a., transcription elongation factor GreB (RefSeq) from Shewanella sp. ANA-3

 Score =  107 bits (268), Expect = 7e-29
 Identities = 64/152 (42%), Positives = 93/152 (61%), Gaps = 2/152 (1%)

Query: 6   LTKRGAELLKEELHRLKTKDRPEVINAIAEARAQGDLSENAEYESAKERQAFIEGRIADL 65
           +T++G   L +EL  L  + RP++   + EA AQGD SENA+Y   K     I+ R+  L
Sbjct: 6   ITRQGWMTLDKELKYLWKEYRPQITLKVQEAAAQGDRSENADYTYNKRLLRQIDSRVRYL 65

Query: 66  EGKLGAAQIVDPAELNAEGRVVFASTVDLENLDSGEKVTYQIVGLDEADIKESKVSVTSP 125
             +L   +IVD +    EG++ F +  +LEN ++GE V Y+IVG DE D K   +++ SP
Sbjct: 66  VKRLEELKIVDYSP-QQEGKIYFGAWFELEN-EAGECVRYRIVGKDELDTKLGYITIDSP 123

Query: 126 IARALIGKSAGDVVAVEAPSGLKEYEILEVRY 157
           +ARALIGK   D V V+ PSG KE+ I ++RY
Sbjct: 124 MARALIGKQVDDEVVVQTPSGPKEWYINDIRY 155